DN617298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_SCHPO (Tubulin beta chain OS=Schizosaccharomyces pombe GN=nda3 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.349e-36 Identity = 68/85 (80.00%), Postives = 79/85 (92.94%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIP+NV +VC +PP+ L M++TFIGNSTSIQE+FRR+ +QF+AMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ+A Sbjct: 344 WIPDNVLKAVCSVPPKDLKMSATFIGNSTSIQEIFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEA 428
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB1_COLGR (Tubulin beta-1 chain OS=Colletotrichum graminicola GN=TUB1 PE=3 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.373e-36 Identity = 67/85 (78.82%), Postives = 78/85 (91.76%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNN++++ C +PP+GL ++STFIGNST+IQ FRRV +QF+ MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA Sbjct: 342 WIPNNIQTAHCSVPPKGLDVSSTFIGNSTAIQNSFRRVGDQFSLMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 426
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_MELLI (Tubulin beta chain OS=Melampsora lini GN=TUB1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.712e-36 Identity = 67/85 (78.82%), Postives = 80/85 (94.12%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNNV+++ CDI PRGL M+ TFIGNST+IQ++F+R+++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM DLV+EYQQYQ+A Sbjct: 344 WIPNNVQTAHCDIAPRGLKMSVTFIGNSTAIQDLFKRIADQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLVAEYQQYQEA 428
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB1_COLGL (Tubulin beta-1 chain OS=Colletotrichum gloeosporioides GN=TUB1 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 5.712e-36 Identity = 68/85 (80.00%), Postives = 79/85 (92.94%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNNV+++ C IPP G++ +STFIGNST+IQ++FRRV +QF+ MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA Sbjct: 345 WIPNNVQTAHCSIPPVGMNASSTFIGNSTAIQDIFRRVGDQFSVMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB1_TRIVI (Tubulin beta-1 chain OS=Trichoderma viride GN=tub1 PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.272e-35 Identity = 68/87 (78.16%), Postives = 80/87 (91.95%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNN++++ PPRGL ++STF+GNST+IQE+FRRV EQF+AMFRR+AFLHWYT EGMDEMEFTEAESNMNDLVSEYQQYQDA+A Sbjct: 346 WIPNNIQTACALSPPRGLKISSTFVGNSTAIQEIFRRVGEQFSAMFRRQAFLHWYTSEGMDEMEFTEAESNMNDLVSEYQQYQDASA 432
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_YEAST (Tubulin beta chain OS=Saccharomyces cerevisiae GN=TUB2 PE=1 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.662e-35 Identity = 66/86 (76.74%), Postives = 80/86 (93.02%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV+++VC + P+GL MA+TFI NSTSIQE+F+RV +QF+AMF+RKAFLHWYT EGMDE+EF+EAESNMNDLVSEYQQYQ+AT Sbjct: 344 WIPNNVQTAVCSVAPQGLDMAATFIANSTSIQELFKRVGDQFSAMFKRKAFLHWYTSEGMDELEFSEAESNMNDLVSEYQQYQEAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_BOMMO (Tubulin beta chain OS=Bombyx mori PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.248e-35 Identity = 63/86 (73.26%), Postives = 81/86 (94.19%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV+++VCDIPPRG+ M++TFIGN+T+IQE+F+R+SEQF AMF RKAFLHWYTGEGM+E +F EA++N++DL+SEYQQYQDAT Sbjct: 344 WIPNNVQTAVCDIPPRGMKMSATFIGNTTAIQEIFKRISEQFAAMFSRKAFLHWYTGEGMEEGDFAEADNNVSDLLSEYQQYQDAT 429
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB_UROFA (Tubulin beta chain OS=Uromyces fabae GN=TBB1 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.407e-34 Identity = 66/85 (77.65%), Postives = 78/85 (91.76%), Query Frame = -3 Query: 440 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDA 694 WIPNNV+++ CDI PR M+ TFIGNST+IQ++F+RV++QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM DLV+EYQQYQ+A Sbjct: 344 WIPNNVQTAHCDIAPRAHKMSVTFIGNSTAIQDLFKRVADQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMQDLVAEYQQYQEA 428
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB1_HUMAN (Tubulin beta-1 chain OS=Homo sapiens GN=TUBB1 PE=1 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.837e-34 Identity = 67/87 (77.01%), Postives = 79/87 (90.80%), Query Frame = -3 Query: 434 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 694 WIPNNVK +VCDIPPRGLSMA+TFIGN+T+IQE+F RVSE F+AMF+RKAF+HWYT EGMD EF EAE+N++DLVSEYQQ+QDA A Sbjct: 344 WIPNNVKVAVCDIPPRGLSMAATFIGNNTAIQEIFNRVSEHFSAMFKRKAFVHWYTSEGMDINEFGEAENNIHDLVSEYQQFQDAKA 430
BLAST of DN617298 vs. ExPASy Swiss-Prot
Match: TBB1_GEOCN (Tubulin beta-1 chain OS=Geotrichum candidum PE=3 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 9.119e-34 Identity = 63/86 (73.26%), Postives = 77/86 (89.53%), Query Frame = -3 Query: 437 WIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAT 694 WIPNNV++++C +PP+ + M++TFI NSTSIQE+F+RV +QF+AMFRRKAFLHWYT EGMD EF EAESNMNDLVSEYQQYQ+AT Sbjct: 344 WIPNNVQTAICSVPPKDVKMSATFIANSTSIQELFKRVGDQFSAMFRRKAFLHWYTNEGMDITEFAEAESNMNDLVSEYQQYQNAT 429 The following BLAST results are available for this feature:
BLAST of DN617298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 258
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617298 ID=DN617298; Name=DN617298; organism=Citrus sinensis; type=EST; length=696bpback to top |