DN617297

Overview
NameDN617297
Unique NameDN617297
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:953..1582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 8.653e-14
Identity = 34/93 (36.56%), Postives = 55/93 (59.14%), Query Frame = -3
Query:  347 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED------GVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 607
            P+S+     +  +FY+ GV    K   +  +++H V+ VGYGV D       +PYW++KNSWG  WG+ GY+++  G N CG++  A+  V+A
Sbjct:  523 PISIGINA-NAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDYPNFHKTLPYWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 614          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVHZ (Viral cathepsin OS=Heliothis zea nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 8.653e-14
Identity = 31/77 (40.26%), Postives = 52/77 (67.53%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            PV++A + +D    Y+ G+ +         D+NHAV+ +G+G+E+ VPYW+IKNSWGE+WG++G+ ++    N CG+
Sbjct:  285 PVAIAVDAMDIIN-YRRGILNQCHI----YDLNHAVLLIGWGIENNVPYWIIKNSWGEDWGENGFLRVRRNVNACGL 356          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.130e-13
Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = -3
Query:  353 PVSVAFEVVD-GFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKME----MGKNMCGIATCASYPV 607
            PVS+A E     F+ YKSG+++  KCG     V+H VV  GYG E+G+ YW+++NSWG N  ++GY +++        +CG+A   SYPV
Sbjct:  148 PVSIALEAGGRDFQHYKSGIFTG-KCGTA---VDHGVVIAGYGTENGMDYWIVRNSWGANCRENGYLRVQRNVSSSSGLCGLAIEPSYPV 233          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CPR3_CAEEL (Cathepsin B-like cysteine proteinase 3 OS=Caenorhabditis elegans GN=cpr-3 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.130e-13
Identity = 36/77 (46.75%), Postives = 50/77 (64.94%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            PV  +++V + F  YKSGVY  T   +  +   HAV  +G+GVE+GV YWLI NSWG ++G+ G+FK+  G N C I
Sbjct:  254 PVEASYKVYEDFYHYKSGVYHYT---SGKLVGGHAVKIIGWGVENGVDYWLIANSWGTSFGEKGFFKIRRGTNECQI 327          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVSE (Viral cathepsin OS=Spodoptera exigua nuclear polyhedrosis virus (strain US) GN=VCATH PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.130e-13
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            P+++A + VD   +Y  G+ S   C N  +  NHAV+ VGYGVE+ VPYW+IKNSWG ++G+ GY ++  G N CG+
Sbjct:  255 PIAIAVDAVDLTDYY-GGIVSF--CENNGL--NHAVLLVGYGVENNVPYWIIKNSWGSDYGEDGYVRVRRGVNSCGM 326          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVCF (Viral cathepsin OS=Choristoneura fumiferana nuclear polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.130e-13
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            P+ VA +  D    YK G+     C N  +  NHAV+ VGY VE+GVP+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  242 PIPVAIDASDIVN-YKRGIMKY--CANHGL--NHAVLLVGYAVENGVPFWILKNTWGADWGEQGYFRVQQNINACGI 313          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVCD (Viral cathepsin OS=Choristoneura fumiferana defective polyhedrosis virus GN=Vcath PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.130e-13
Identity = 37/80 (46.25%), Postives = 52/80 (65.00%), Query Frame = -3
Query:  377 LV*PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 616
            +V P+ VA +  D    YK GV     C N  +  NHAV+ VGY VE+GVP+W++KN+WG +WG+ GYF+++   N CGI
Sbjct:  239 IVGPLPVAIDASDIVN-YKRGVIRY--CANHGL--NHAVLLVGYAVENGVPFWILKNTWGTDWGEQGYFRVQQNINACGI 313          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.130e-13
Identity = 34/100 (34.00%), Postives = 57/100 (57.00%), Query Frame = -3
Query:  323 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVED-GVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPVVA*SAPEEIV 607
            P++   +  + F++Y  GV+S   CG +   +NHA+  +GYG +  G  YW+++NSWG +WG+ GY +M  G      +CGIA    +P +   A  E++
Sbjct:  250 PIAALIDASENFQYYNGGVFSGP-CGTS---LNHAITIIGYGQDSSGTKYWIVRNSWGSSWGEGGYVRMARGVSSSSGVCGIAMAPLFPTLQSGANAEVI 345          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP1_OSTOS (Cathepsin B-like cysteine proteinase 1 OS=Ostertagia ostertagi GN=CP-1 PE=3 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 31/76 (40.79%), Postives = 46/76 (60.53%), Query Frame = -3
Query:  380 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCG 607
            PV   + V + F  Y+SG+Y       T +   HAV  +G+G E G PYW++ NSW ++WG++G+F+M  G N CG
Sbjct:  258 PVVATYTVYEDFAHYRSGIYKHKAGRKTGL---HAVKVIGWGEEKGTPYWIVANSWHDDWGENGFFRMHRGSNDCG 330          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CPR5_CAEEL (Cathepsin B-like cysteine proteinase 5 OS=Caenorhabditis elegans GN=cpr-5 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            P+ VAF V + F  Y +GVY  T   +      HAV  +G+GV++G PYWL+ NSW   WG+ GYF++  G N CGI
Sbjct:  256 PIEVAFTVYEDFYQYTTGVYVHTAGASLG---GHAVKILGWGVDNGTPYWLVANSWNVAWGEKGYFRIIRGLNECGI 329          
The following BLAST results are available for this feature:
BLAST of DN617297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CPR1_DROME8.653e-1436.56Putative cysteine proteinase CG12163 OS=Drosophila... [more]
CATV_NPVHZ8.653e-1440.26Viral cathepsin OS=Heliothis zea nuclear polyhedro... [more]
CYSPL_SOLLC1.130e-1342.22Low-temperature-induced cysteine proteinase (Fragm... [more]
CPR3_CAEEL1.130e-1346.75Cathepsin B-like cysteine proteinase 3 OS=Caenorha... [more]
CATV_NPVSE1.130e-1346.75Viral cathepsin OS=Spodoptera exigua nuclear polyh... [more]
CATV_NPVCF1.130e-1345.45Viral cathepsin OS=Choristoneura fumiferana nuclea... [more]
CATV_NPVCD1.130e-1346.25Viral cathepsin OS=Choristoneura fumiferana defect... [more]
BROM1_ANACO1.130e-1334.00Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CYSP1_OSTOS1.476e-1340.79Cathepsin B-like cysteine proteinase 1 OS=Ostertag... [more]
CPR5_CAEEL1.476e-1345.45Cathepsin B-like cysteine proteinase 5 OS=Caenorha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617297 ID=DN617297; Name=DN617297; organism=Citrus sinensis; type=EST; length=630bp
TTTTTTTTTTTTTTTTTAGGGGCAGAAGACAACCAAATTTTTTAAGCAAT
GCATTGATATTTGCCTAAAGCTTCCATATAACAACTACCTTGCATTGACA
AAATATATATAACATCGTTGGTGTCCTAGTCACAATGACTGTTTACATGG
ACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTAT
TGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCA
ACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAA
TGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCC
ACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCAT
CTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCT
TAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACG
ACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTA
AACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACAC
TCACAGGTCAAACAAGACCAACTGCATGCT
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