DN617297

Overview
NameDN617297
Unique NameDN617297
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:953..1582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CPR3_ARATH (Probable cysteine proteinase At4g11310 OS=Arabidopsis thaliana GN=At4g11310 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 38/78 (48.72%), Postives = 50/78 (64.10%), Query Frame = -3
Query:  353 FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYPV 574
            F+ Y+SGV+  + CG    ++NH VV VGYG E+G  YWL+KNS G  WG+ GY KM       + +CGIA  ASYP+
Sbjct:  279 FQLYESGVFDGS-CGT---NLNHGVVVVGYGTENGRDYWLVKNSRGITWGEAGYMKMARNIANPRGLCGIAMRASYPL 352          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.476e-13
Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            P+++A + VD   +Y  GV S   C N  +  NHAV+ VGYG+E+ VPYW IKNSWG ++G++GY ++  G N CG+
Sbjct:  255 PIAIAVDAVDLTDYY-GGVISF--CENNGL--NHAVLLVGYGIENNVPYWTIKNSWGSDYGENGYVRIRRGVNSCGM 326          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP_SCHJA (Cathepsin B-like cysteine proteinase OS=Schistosoma japonicum GN=CATB PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.294e-13
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            PV  AF+V + F  YKSG+Y         +   HA+  +G+GVE   PYWLI NSW E+WG+ G F+M  G++ C I
Sbjct:  258 PVEAAFDVYEDFLNYKSGIYRHV---TGSIVGGHAIRIIGWGVEKRTPYWLIANSWNEDWGEKGLFRMVRGRDECSI 331          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVRO (Viral cathepsin OS=Rachiplusia ou multiple nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.294e-13
Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = -3
Query:  377 LV*PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 616
            LV P+ +A +  D    YK G+     C N+ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  238 LVGPIPMAIDAADIVN-YKQGIIKY--CFNSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEEGFFRVQQNINACGM 312          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVOP (Viral cathepsin OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.294e-13
Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            P+ VA +  D    Y+ G+    +C N  +  NHAV+ VGY VE+ +PYW++KN+WG +WG+ GYF+++   N CGI
Sbjct:  242 PIPVAIDASDIVN-YRRGIMR--QCANHGL--NHAVLLVGYAVENNIPYWILKNTWGTDWGEDGYFRVQQNINACGI 313          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP_SCHMA (Cathepsin B-like cysteine proteinase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.609e-13
Identity = 33/77 (42.86%), Postives = 47/77 (61.04%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            PV  +F V + F  YKSG+Y             HA+  +G+GVE+  PYWLI NSW E+WG++GYF++  G++ C I
Sbjct:  257 PVEASFTVYEDFLNYKSGIYKHITGEALG---GHAIRIIGWGVENKTPYWLIANSWNEDWGENGYFRIVRGRDECSI 330          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP3_OSTOS (Cathepsin B-like cysteine proteinase 3 (Fragment) OS=Ostertagia ostertagi GN=CP-3 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.609e-13
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            PV   F V + F  YKSG+Y  T      M   HAV  +G+G E G PYWLI NSW ++WG+ G+++M  G N C I
Sbjct:   92 PVVAGFIVYEDFAHYKSGIYKHTA---GRMTGGHAVKIIGWGKEKGTPYWLIANSWHDDWGEKGFYRMIRGINNCRI 165          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVAC (Viral cathepsin OS=Autographa californica nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.609e-13
Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = -3
Query:  377 LV*PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 616
            LV P+ +A +  D    YK G+     C N+ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  238 LVGPIPMAIDAADIVN-YKQGIIKY--CFNSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 5.609e-13
Identity = 37/96 (38.54%), Postives = 58/96 (60.42%), Query Frame = -3
Query:  347 AVGLV*PVSVAFEVVDG--FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKM-EMGKNMCGIATCASYPVVA 625
            AVG + P+S    VV G   + Y  G++  + C     +++H V  VGYG+E+G  YW+IKN+WG +WG+ GY ++     + CG+   ASYP++A
Sbjct:  234 AVGTIGPISA---VVFGKPMKSYGGGIFDDSSCLGD--NLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDTDHSCGVEKMASYPILA 324          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP5_DICDI (Cysteine proteinase 5 OS=Dictyostelium discoideum GN=cprE PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.325e-13
Identity = 42/107 (39.25%), Postives = 55/107 (51.40%), Query Frame = -3
Query:  350 PVSVAFEVV-DGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVP-------------------YWLIKNSWGENWGDHGYFKMEMGK-NMCGIATCASYPVV 607
            PVSVA +     F+ Y SG+Y   +C +  +D  H V+AVGYG   G                     YW++KNSWG +WG  GY  M   + N CGIA+ AS+PVV
Sbjct:  240 PVSVAIDASHQSFQLYTSGIYYEPECSSENLD--HGVLAVGYGSGSGSSSGQSSGQSSGNLSASSSNEYWIVKNSWGTSWGIEGYILMSRNRDNNCGIASSASFPVV 344          
The following BLAST results are available for this feature:
BLAST of DN617297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CPR3_ARATH1.476e-1348.72Probable cysteine proteinase At4g11310 OS=Arabidop... [more]
CATV_NPVMC1.476e-1346.75Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CYSP_SCHJA4.294e-1344.16Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CATV_NPVRO4.294e-1342.50Viral cathepsin OS=Rachiplusia ou multiple nucleop... [more]
CATV_NPVOP4.294e-1342.86Viral cathepsin OS=Orgyia pseudotsugata multicapsi... [more]
CYSP_SCHMA5.609e-1342.86Cathepsin B-like cysteine proteinase OS=Schistosom... [more]
CYSP3_OSTOS5.609e-1345.45Cathepsin B-like cysteine proteinase 3 (Fragment) ... [more]
CATV_NPVAC5.609e-1342.50Viral cathepsin OS=Autographa californica nuclear ... [more]
CATLL_PHACE5.609e-1338.54Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP5_DICDI7.325e-1339.25Cysteine proteinase 5 OS=Dictyostelium discoideum ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617297 ID=DN617297; Name=DN617297; organism=Citrus sinensis; type=EST; length=630bp
TTTTTTTTTTTTTTTTTAGGGGCAGAAGACAACCAAATTTTTTAAGCAAT
GCATTGATATTTGCCTAAAGCTTCCATATAACAACTACCTTGCATTGACA
AAATATATATAACATCGTTGGTGTCCTAGTCACAATGACTGTTTACATGG
ACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTAT
TGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCA
ACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAA
TGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCC
ACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCAT
CTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCT
TAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACG
ACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTA
AACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACAC
TCACAGGTCAAACAAGACCAACTGCATGCT
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