DN617297

Overview
NameDN617297
Unique NameDN617297
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:953..1582. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP2_HAECO (Cathepsin B-like cysteine proteinase 2 OS=Haemonchus contortus GN=AC-2 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 7.325e-13
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            PV  +F V + FR YKSG+Y  T      +   HAV  +G+G E+   +WLI NSW  +WG+ GYF++  G N CGI
Sbjct:  255 PVVASFAVYEDFRHYKSGIYKHTA---GELRGYHAVKMIGWGNENNTDFWLIANSWHNDWGEKGYFRIVRGSNDCGI 328          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12
Identity = 36/91 (39.56%), Postives = 55/91 (60.44%), Query Frame = -3
Query:  350 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV--EDGVPYWLIKNSWGENWGDHGYFKME---MGKNMCGIATCASYPVV 607
            P  V   V    + Y  G+++  KCG    ++NHAV+ VG GV  E G+ YW+IKNSWGE+WG++G+ +++    G + CGI T    P++
Sbjct:  352 PTVVGIAVTKELKLYSGGIFTG-KCGG---ELNHAVLLVGEGVDHETGMRYWIIKNSWGEDWGENGFLRLQRTKKGLDKCGILTFGLNPIL 438          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP1_HAECO (Cathepsin B-like cysteine proteinase 1 OS=Haemonchus contortus GN=AC-1 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            PV  +F V + FR YKSG+Y  T      +   HAV  +G+G E+   +WLI NSW  +WG+ GYF++  G N CGI
Sbjct:  255 PVVASFAVYEDFRHYKSGIYKHTA---GELRGYHAVKMIGWGNENNTDFWLIANSWHNDWGEKGYFRIIRGTNDCGI 328          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATB_CHICK (Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.249e-12
Identity = 35/77 (45.45%), Postives = 45/77 (58.44%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            PV  AF V + F  YKSGVY             HA+  +G+GVE+G PYWL  NSW  +WG  G+FK+  G++ CGI
Sbjct:  249 PVEGAFIVYEDFLMYKSGVYQHVSGEQVG---GHAIRILGWGVENGTPYWLAANSWNTDWGITGFFKILRGEDHCGI 322          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12
Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = -3
Query:  347 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 607
            P+++A +    F  YKSGV   T C      +NH V+ VGY +   VPYW+IKNSWG +WG+ GY ++ MG N C     + YPV A
Sbjct:  260 PIAIALDA-SSFMSYKSGVL--TAC--IGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNAC---LLSEYPVSA 338          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12
Identity = 38/87 (43.68%), Postives = 51/87 (58.62%), Query Frame = -3
Query:  347 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGIATCASYPVVA 607
            P+++A +    F  YKSGV   T C      +NH V+ VGY +   VPYW+IKNSWG +WG+ GY ++ MG N C     + YPV A
Sbjct:  261 PIAIALDA-SSFMSYKSGVL--TAC--IGKQLNHGVLLVGYDMTGEVPYWVIKNSWGGDWGEQGYVRVVMGVNAC---LLSEYPVSA 339          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVBM (Viral cathepsin OS=Bombyx mori nuclear polyhedrosis virus GN=VCATH PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12
Identity = 33/80 (41.25%), Postives = 51/80 (63.75%), Query Frame = -3
Query:  377 LV*PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 616
            LV P+ +A +  D    YK G+     C ++ +  NHAV+ VGYGVE+ +PYW  KN+WG +WG+ G+F+++   N CG+
Sbjct:  238 LVGPIPMAIDAADIVN-YKQGIIKY--CFDSGL--NHAVLLVGYGVENNIPYWTFKNTWGTDWGEDGFFRVQQNINACGM 312          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATL1_FELCA (Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12
Identity = 34/73 (46.58%), Postives = 45/73 (61.64%), Query Frame = -3
Query:  404 PVSVAFEV-VDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVE----DGVPYWLIKNSWGENWGDHGYFKM 607
            P+S A +  +D FRFYK G+Y    C +   DV+H V+ VGYG +    +   YW+IKNSWG +WG  GY KM
Sbjct:   65 PISAAIDASLDTFRFYKEGIYYDPSCSSE--DVDHGVLVVGYGADGTETENKKYWIIKNSWGTDWGMDGYIKM 135          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12
Identity = 36/89 (40.45%), Postives = 53/89 (59.55%), Query Frame = -3
Query:  356 PVSVAFEVVDG-FRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMG----KNMCGIATCASYP 607
            P+SVA +     F+FY  GV+   +CG   +D++H V AVGYG   G  Y ++KNSWG  WG+ GY +++      + +CGI   AS+P
Sbjct:  268 PLSVAIDASGREFQFYSGGVFDG-RCG---VDLDHGVAAVGYGSSKGSDYIIVKNSWGPKWGEKGYIRLKRNTGKPEGLCGINKMASFP 352          
BLAST of DN617297 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 4.748e-12
Identity = 30/77 (38.96%), Postives = 46/77 (59.74%), Query Frame = -3
Query:  377 PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGVEDGVPYWLIKNSWGENWGDHGYFKMEMGKNMCGI 607
            P+++A +      + K  ++     G     +NHAV+ VGYG E GV YW +KNSWG +WG+ GYF+++   N CG+
Sbjct:  255 PIAMAIDAASISTYSKGIIHFCENLG-----LNHAVLLVGYGTEGGVSYWTLKNSWGSDWGEDGYFRVKRNINACGL 326          
The following BLAST results are available for this feature:
BLAST of DN617297 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CYSP2_HAECO7.325e-1344.16Cathepsin B-like cysteine proteinase 2 OS=Haemonch... [more]
CYSP_THEAN1.249e-1239.56Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]
CYSP1_HAECO1.249e-1244.16Cathepsin B-like cysteine proteinase 1 OS=Haemonch... [more]
CATB_CHICK1.249e-1245.45Cathepsin B OS=Gallus gallus GN=CTSB PE=2 SV=1[more]
LMCPB_LEIME2.131e-1243.68Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI2.131e-1243.68Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CATV_NPVBM2.131e-1241.25Viral cathepsin OS=Bombyx mori nuclear polyhedrosi... [more]
CATL1_FELCA2.131e-1246.58Cathepsin L1 (Fragment) OS=Felis catus GN=CTSL1 PE... [more]
XCP2_ARATH4.748e-1240.45Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CATV_NPVAH4.748e-1238.96Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A09_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617297 ID=DN617297; Name=DN617297; organism=Citrus sinensis; type=EST; length=630bp
TTTTTTTTTTTTTTTTTAGGGGCAGAAGACAACCAAATTTTTTAAGCAAT
GCATTGATATTTGCCTAAAGCTTCCATATAACAACTACCTTGCATTGACA
AAATATATATAACATCGTTGGTGTCCTAGTCACAATGACTGTTTACATGG
ACATAGATCTCAGAATTTATTTTGAACATCAAGCAGCCATGCATTGCTAT
TGTAGATTATATGGACATTAATCTCCGAATTTATTTCGTACATAAAGCCA
ACCATTCTGCTATCATTCTTGAGTGAAATAATATAAGTTTTATGAGCAAA
TGACTTGCTGATAGCCAGATCCAACTATTTCTTCAGGAGCAGACTAAGCC
ACAACTGGGTATGATGCACAAGTTGCAATACCACACATGTTCTTCCCCAT
CTCCATCTTAAAGTAGCCATGATCGCCCCAGTTCTCTCCCCAAGAGTTCT
TAATCAGCCAATATGGAACACCATCTTCAACTCCGTACCCAACAGCAACG
ACGGCATGGTTCACATCCATGGGAGTATTTCCACATTTAGTGCTGCTGTA
AACTCCACTCTTGTAAAATCGGAATCCATCTACTACTTCAAATGCCACAC
TCACAGGTCAAACAAGACCAACTGCATGCT
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