DN617291

Overview
NameDN617291
Unique NameDN617291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:249..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BAS1_ORYSJ (2-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza sativa subsp. japonica GN=BAS1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.220e-15
Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = -3
Query:  200 GQAPPSFTLK---DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G   P F  +   DQE  NV LS + GK  V+++FYP D T  C  +  AF D Y++F+K   E++G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DET++ LQ+
Sbjct:   71 GNKAPDFDAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRYDEFEKLNTEILGVSIDSVFSHLAWVQTDRKSGGLGDLKYPLISDVTKSISKSFGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLAIGRSVDETMRTLQA 224          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: YCF42_PORPU (Putative peroxiredoxin ycf42 OS=Porphyra purpurea GN=ycf42 PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.198e-15
Identity = 49/154 (31.82%), Postives = 79/154 (51.30%), Query Frame = -3
Query:  200 GQAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            GQ  P F+   + DQE + + LS FK K V+++FYP D T  C  +  AF D Y  F +   E++G+S D   SH A+ +  R       L Y L+SD   ++   + V     G +  R  +++D  G++Q    N  +  + ++ETL+ LQ+
Sbjct:   11 GQIAPDFSATAVYDQEFKTIKLSDFKNKYVILFFYPLDFTFVCPTEITAFSDKYSDFSELNTEILGVSVDSEYSHLAWLQTDRESGGLGDLEYPLVSDLKKEISIAYNVLNS--GGVALRGLFIIDPKGIIQYSTVNNLEFGRSVEETLRVLQA 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BAS1_WHEAT (2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) OS=Triticum aestivum GN=TSA PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = -3
Query:  200 GQAPPSFTLK---DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G   P F  +   DQE  NV LS + GK  V+++FYP D T  C  +  AF D +E+F+K   E++G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DETL+ L++
Sbjct:   21 GNKAPDFAAEAVFDQEFINVKLSDYIGKKYVILFFYPLDFTFVCPTEITAFSDRHEEFEKINTEILGVSVDSVFSHLAWVQTERKSGGLGDLKYPLVSDVTKSISKSFGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETLRTLRA 174          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: BAS1B_ARATH (2-Cys peroxiredoxin BAS1-like, chloroplastic OS=Arabidopsis thaliana GN=At5g06290 PE=2 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 9.400e-15
Identity = 55/155 (35.48%), Postives = 81/155 (52.26%), Query Frame = -3
Query:  200 GQAPPSFTLK---DQEGRNVSLSKFKGKP-VVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G   P F  +   DQE   V LS++ GK  V+++FYP D T  C  +  AF D YE+F+K   EV+G+S D   SH A+ +  R       L Y L+SD    + K +GV     G +  R  +++DK GV+Q    N     + +DET++ LQ+
Sbjct:   81 GNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRYEEFEKLNTEVLGVSVDSVFSHLAWVQTDRKSGGLGDLNYPLVSDITKSISKSFGVLIPDQG-IALRGLFIIDKEGVIQHSTINNLGIGRSVDETMRTLQA 234          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH_THEVO (Probable peroxiredoxin OS=Thermoplasma volcanium GN=TV1123 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14
Identity = 43/150 (28.67%), Postives = 87/150 (58.00%), Query Frame = -3
Query:  200 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            GQ  P FT+   +G  ++LS ++GK V+++ +P D TP CT +  AF + YE F+K G E+IG+S D   SH A+ +  +      +P+ +++D   +V +E+ +  +  G+   R  +++D N +V+ +     +  ++I+E ++ +++
Sbjct:    6 GQKAPDFTVNTSKGP-ITLSNYRGKWVLLFSHPGDFTPVCTTEFIAFTERYEDFQKLGVELIGLSIDSVFSHIAWIRDIKEHFGIDIPFPIIADIDKEVAREYNLIDEKSGATV-RGVFIIDPNQIVRWMIYYPAETGRNIEEIIRVIKA 153          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX_ASCSU (Peroxiredoxin OS=Ascaris suum PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.094e-14
Identity = 48/159 (30.19%), Postives = 85/159 (53.46%), Query Frame = -3
Query:  200 AKVSKGQAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 646
            +K   G+  P FT   + D + +++SLS +KGK VV++FYP D T  C  +  AF +   +FKK G EV+  S D   SH A+    R       +   ++SD  +++ +++GV  +  G +  R  +++D  G+++ I  N     + + ETL+ +Q+
Sbjct:    2 SKAMIGKPAPEFTATAVVDGDFKSISLSDYKGKYVVLFFYPMDFTFVCPTEIIAFSEHVGEFKKLGVEVLAASTDSQFSHLAWINTPRKQGGLGEMKIPIISDNNHQISRDYGVLKEDDG-IAYRGLFIIDPKGILRQITVNDLPVGRSVTETLRLVQA 159          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDX_ONCMY (Peroxiredoxin OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.572e-14
Identity = 49/161 (30.43%), Postives = 80/161 (49.69%), Query Frame = -3
Query:  200 SAKVSKGQAPPSFTLK----DQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            + K   G   P FT K    D + +++S+S ++GK VV +FYP D T  C  +  AF D+ E+F+K G EVIG S D    H A+    R       +   L++D    +  ++GV      + P    +++D  GV++ I  N     + +DE L+ +Q+
Sbjct:    3 AGKARIGHLAPGFTAKAVMPDGQFKDISMSDYRGKYVVFFFYPLDFTFVCPTEIIAFSDAAEEFRKIGCEVIGASVDSHFCHLAWTNTPRKHGGLGAMKIPLVADTMRSISTDYGVFEGGMRASPTGGLFIIDDKGVLRQITINDLPVGRCVDEILRLVQA 163          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: DOT5_YEAST (Peroxiredoxin DOT5 OS=Saccharomyces cerevisiae GN=DOT5 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.665e-14
Identity = 40/90 (44.44%), Postives = 54/90 (60.00%), Query Frame = -3
Query:  368 GQAPPSFTLKDQEGRNVSLSKF--KGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYRLPYTLLSD 631
            G   P  +L +++  ++SL K     + VV + YP   TPGCT+QAC FRD+Y++ KK  A V G+S D  +S K F  K  LPY LLSD
Sbjct:   66 GDPIPDLSLLNEDNDSISLKKITENNRVVVFFVYPRASTPGCTRQACGFRDNYQELKKYAA-VFGLSADSVTSQKKFQSKQNLPYHLLSD 154          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: Y755_SYNY3 (Putative peroxiredoxin sll0755 OS=Synechocystis sp. (strain PCC 6803) GN=sll0755 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.093e-14
Identity = 49/154 (31.82%), Postives = 80/154 (51.95%), Query Frame = -3
Query:  200 GQAPPSFT---LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            GQ  P FT   + DQ  + V LS ++GK +V++FYP D T  C  +  AF D + +F     EV+GIS D   SH A+ +  R       + Y L+SD   ++ + + V     G +  R  +++D+ G++Q    N     + +DETL+ L++
Sbjct:    8 GQPAPDFTATAIVDQSFQTVKLSTYRGKYLVLFFYPLDFTFVCPTEIIAFSDRHSEFTALDTEVVGISVDSEFSHLAWIQTERKMGGIGNINYPLVSDLKKEISQAYNVLEPDAG-IALRGLFIIDREGILQYATVNNLSFGRSVDETLRVLKA 160          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX1_CHICK (Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.958e-14
Identity = 48/161 (29.81%), Postives = 83/161 (51.55%), Query Frame = -3
Query:  200 SAKVSKGQAPPSFT----LKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            S K   G+  P FT    + D + +++ LS ++GK VV +FYP D T  C  +  A+ D  ++FKK   E+IG S D    H A+    +       +   L+SD    + K++GV  +  G +  R  +++D+ G+++ I  N     + +DETL+ +Q+
Sbjct:    3 SGKAFIGKPAPDFTATAVMPDGQFKDIKLSDYRGKYVVFFFYPLDFTFVCPTEIIAYSDRADEFKKINCEIIGASVDSHFCHLAWINTPKKQGGLGTMKIPLVSDTKRVIAKDYGVLKEDEG-IAYRGLFIIDEKGILRQITINDLPVGRSVDETLRLVQA 162          
The following BLAST results are available for this feature:
BLAST of DN617291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
BAS1_ORYSJ4.220e-1534.842-Cys peroxiredoxin BAS1, chloroplastic OS=Oryza s... [more]
YCF42_PORPU7.198e-1531.82Putative peroxiredoxin ycf42 OS=Porphyra purpurea ... [more]
BAS1_WHEAT9.400e-1534.842-Cys peroxiredoxin BAS1, chloroplastic (Fragment)... [more]
BAS1B_ARATH9.400e-1535.482-Cys peroxiredoxin BAS1-like, chloroplastic OS=Ar... [more]
TDXH_THEVO2.094e-1428.67Probable peroxiredoxin OS=Thermoplasma volcanium G... [more]
PRDX_ASCSU2.094e-1430.19Peroxiredoxin OS=Ascaris suum PE=2 SV=1[more]
TDX_ONCMY3.572e-1430.43Peroxiredoxin OS=Oncorhynchus mykiss PE=2 SV=1[more]
DOT5_YEAST4.665e-1444.44Peroxiredoxin DOT5 OS=Saccharomyces cerevisiae GN=... [more]
Y755_SYNY36.093e-1431.82Putative peroxiredoxin sll0755 OS=Synechocystis sp... [more]
PRDX1_CHICK7.958e-1429.81Peroxiredoxin-1 OS=Gallus gallus GN=PRDX1 PE=1 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617291 ID=DN617291; Name=DN617291; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTTTTTTTTTTTTGTGACAAGAAGTATCACTGATTTTTATTTCCTT
GTTAAACCAGAGTTGTTCAACTTGCTTGAGCTGAAAGTTTAATATTTCTT
ATTTCAGAAATTGAGGGTCTAAACTCAGCTAACAGCTTCGTTAATTACAG
AGGATTTTGAATCAAGCATGAACAAGGCAATACATTGAGATGTTCAACTG
CTTTGAAGAAACTTCAAGGTCTCATCAATGTGTTTTTCAGGTTGGAACTG
GTTGTTGTAGATGAGCTGAACCACTCCATTCTTGTCAAGAACGTAAGTCT
GTCTCCCAGGCAATGATCCAAAGAAGTCTGCTGGAACCCCCCATTCTTTC
CTCACCTTGTTACCCTCGTCGCTCAGCAATGTATATGGAAGCCTATACTT
TTTTGCAAATGCCTTGTGTGACGATGAATCATCACCACTAATCCCAATAA
CCTCAGCTCCTGCTTTCTTAAATTTCTCATAAGAATCCCTAAAAGCGCAT
GCCTGTTTGGTGCAGCCAGGTGTCTCATCAGCAGGGTAAAAATAAACAAC
CACGGGCTTCCCTTTAAACTTGGATAGGCTCACATTCCTGCCCTCTTGAT
CTTTCAATGTGAAGGAAGGAGGCGCCTGTCCTTTGCTCACCTTGGCAGAA
ATGGAAGTCTTGAAAGATGTGGAAGATGGGATTGGCAAGTTGG
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