DN617291

Overview
NameDN617291
Unique NameDN617291
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7350 contig Csv1_Contig7350:249..941. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: RESA_BACHK (Thiol-disulfide oxidoreductase resA OS=Bacillus thuringiensis subsp. konkukian GN=resA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 45/146 (30.82%), Postives = 80/146 (54.79%), Query Frame = -3
Query:  212 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSS-SHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNG-VVQLIYNNQFQPEKHIDETLK 643
            K+  G+  P+F + D EG+ + L  FKGK V + F+     P C K+     + Y K+K+ G E+I +  D++  + K F K+Y L + +  D+G ++ K +GV       +P   ++++DK+G V+Q I     Q ++ ++E LK
Sbjct:   34 KMEIGKEAPNFVVTDLEGKKIELKDFKGKGVFLNFWGTWCKP-CEKEMPYMNELYPKYKEKGVEIIALDADETDIAVKNFVKQYDLKFPVAIDKGGEIIKTYGV-------IPLPTSFLIDKDGKVIQEIKGE--QTKEQLEEYLK 169          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: RESA_BACC1 (Thiol-disulfide oxidoreductase resA OS=Bacillus cereus (strain ATCC 10987) GN=resA PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 45/146 (30.82%), Postives = 80/146 (54.79%), Query Frame = -3
Query:  212 KVSKGQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSS-SHKAFAKKYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNG-VVQLIYNNQFQPEKHIDETLK 643
            K+  G+  P+F + D EG+ + L  FKGK V + F+     P C K+     + Y K+K+ G E+I +  D++  + K F K+Y L + +  D+G ++ K +GV       +P   ++++DK+G V+Q I     Q ++ ++E LK
Sbjct:   34 KMEIGKEAPNFVVTDLEGKKIELKDFKGKGVFLNFWGTWCKP-CEKEMPYMNELYPKYKEKGVEIIALDADETDIAVKNFVKQYDLKFPVAIDKGGEIIKTYGV-------IPLPTSFLIDKDGKVIQEIKGE--QTKEQLEEYLK 169          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX1_CRIGR (Peroxiredoxin-1 OS=Cricetulus griseus GN=PRDX1 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.448e-12
Identity = 48/162 (29.63%), Postives = 80/162 (49.38%), Query Frame = -3
Query:  200 SAKVSKGQAPPSF----TLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGV-PADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            S     G   P+F     + D + R++ LS+++GK VV +FYP D T  C  +  AF D  E+FKK   +VIG S D    H A+    +       +   L+SD    + +++GV  AD    +  R  +++D  G+++ I  N     + +DE L+ +Q+
Sbjct:    3 SGNAKIGYPAPNFKATAVMPDGQFRDICLSEYRGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFKKLNCQVIGASVDSHFCHLAWINTPKKQGGLGPMNIPLVSDPKRTIAQDYGVLKAD--EGISFRGLFIIDDKGILRQITINDLPVGRSVDEILRLVQA 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX3_RAT (Thioredoxin-dependent peroxide reductase, mitochondrial OS=Rattus norvegicus GN=Prdx3 PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 9.728e-12
Identity = 42/139 (30.22%), Postives = 73/139 (52.52%), Query Frame = -3
Query:  200 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 595
            E + +SL  FKGK +V++FYP D T  C  +  AF D   +F     EV+ +S D   SH A+    R       +  TLLSD   ++ +++GV  +  G +  R  +++D NGV++ +  N     + ++E L+ +++
Sbjct:   82 EFKELSLDDFKGKYLVLFFYPLDFTFVCPTEIVAFSDKANEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNITLLSDLTKQISRDYGVLLESAG-IALRGLFIIDPNGVIKHLSVNDLPVGRSVEEPLRLVKA 219          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDX_CYNPY (Peroxiredoxin OS=Cynops pyrrhogaster PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11
Identity = 45/161 (27.95%), Postives = 79/161 (49.07%), Query Frame = -3
Query:  200 SAKVSKGQAPPSFTLK----DQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 649
            + K   G+  P F  K      E +++ L+ ++GK VV +FYP D T  C  +  AF D  E+F+K   E+I  S D    H A+    R       +   L++D    + +++GV  +  G +  R  +++D  G+++ I  N     + +DETL+ +Q+
Sbjct:    3 AGKAQIGKPAPEFQAKAVMPGGEFKDIKLADYRGKYVVFFFYPLDFTFVCPTEIIAFSDRAEEFRKINCELIAASVDSHFCHLAWTNTSRKEGGLGSMKIPLVADTKRTISQDYGVLKEDEG-ISFRGLFIIDDKGILRQITINDLPVGRSVDETLRLVQA 162          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX4_RAT (Peroxiredoxin-4 OS=Rattus norvegicus GN=Prdx4 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = -3
Query:  200 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 595
            E + + L+ ++GK +V +FYP D T  C  +  AF D  E+FK    EV+  S D   +H A+    R       +   LLSD  +++ K++GV  +  G    R  +++D  GV++ I  N     + +DETL+ +Q+
Sbjct:   99 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLNHQISKDYGVYLEDSGHTL-RGLFIIDDKGVLRQITLNDLPVGRSVDETLRLVQA 236          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX4_MOUSE (Peroxiredoxin-4 OS=Mus musculus GN=Prdx4 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.271e-11
Identity = 43/139 (30.94%), Postives = 72/139 (51.80%), Query Frame = -3
Query:  200 EGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 595
            E + + L+ ++GK +V +FYP D T  C  +  AF D  E+FK    EV+  S D   +H A+    R       +   LLSD  +++ K++GV  +  G    R  +++D  GV++ I  N     + +DETL+ +Q+
Sbjct:  100 EFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEFKSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLNHQISKDYGVYLEDSGHTL-RGLFIIDDKGVLRQITLNDLPVGRSVDETLRLVQA 237          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: TDXH2_SULTO (Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN=ST2442 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 41/150 (27.33%), Postives = 75/150 (50.00%), Query Frame = -3
Query:  200 GQAPPSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAK------KYRLPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 631
            G+  P   +    G+      ++GK  V++ +P D TP CT +  +F   YE+FKK   E+IG+S D + SH  +        K  +P+ +++D    V K  G+      +   R  +++D  G+V+LI     +  ++IDE L+ +++
Sbjct:   10 GEKFPEMEVITTHGKIKLPDYYQGKWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWVMWIEKNLKVEIPFPIIADPMGNVAKRLGMIHAESSTSTVRAVFIVDDKGIVRLIMYYPMEIGRNIDEILRSIRA 159          
BLAST of DN617291 vs. ExPASy Swiss-Prot
Match: PRDX4_HUMAN (Peroxiredoxin-4 OS=Homo sapiens GN=PRDX4 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.659e-11
Identity = 48/158 (30.38%), Postives = 81/158 (51.27%), Query Frame = -3
Query:  200 AKVSKGQAP--PSFTLKDQEGRNVSLSKFKGKPVVVYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISGDDSSSHKAFAKKYR-------LPYTLLSDEGNKVRKEWGVPADFFGSLPGRQTYVLDKNGVVQLIYNNQFQPEKHIDETLKFLQS 646
            AK+SK  AP      + D E + + L+ ++GK +V +FYP D T  C  +  AF D  E+F+    EV+  S D   +H A+    R       +   LLSD  +++ K++GV  +  G    R  +++D  G+++ I  N     + +DETL+ +Q+
Sbjct:   79 AKISK-PAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLEDSGHTL-RGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 234          
The following BLAST results are available for this feature:
BLAST of DN617291 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 69
Match NameE-valueIdentityDescription
RESA_BACHK7.448e-1230.82Thiol-disulfide oxidoreductase resA OS=Bacillus th... [more]
RESA_BACC17.448e-1230.82Thiol-disulfide oxidoreductase resA OS=Bacillus ce... [more]
PRDX1_CRIGR7.448e-1229.63Peroxiredoxin-1 OS=Cricetulus griseus GN=PRDX1 PE=... [more]
PRDX3_RAT9.728e-1230.22Thioredoxin-dependent peroxide reductase, mitochon... [more]
TDX_CYNPY1.271e-1127.95Peroxiredoxin OS=Cynops pyrrhogaster PE=2 SV=1[more]
PRDX4_RAT1.271e-1130.94Peroxiredoxin-4 OS=Rattus norvegicus GN=Prdx4 PE=2... [more]
PRDX4_MOUSE1.271e-1130.94Peroxiredoxin-4 OS=Mus musculus GN=Prdx4 PE=1 SV=1[more]
TDXH2_SULTO1.659e-1127.33Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN... [more]
PRDX4_HUMAN1.659e-1130.38Peroxiredoxin-4 OS=Homo sapiens GN=PRDX4 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A05_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617291 ID=DN617291; Name=DN617291; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTTTTTTTTTTTTGTGACAAGAAGTATCACTGATTTTTATTTCCTT
GTTAAACCAGAGTTGTTCAACTTGCTTGAGCTGAAAGTTTAATATTTCTT
ATTTCAGAAATTGAGGGTCTAAACTCAGCTAACAGCTTCGTTAATTACAG
AGGATTTTGAATCAAGCATGAACAAGGCAATACATTGAGATGTTCAACTG
CTTTGAAGAAACTTCAAGGTCTCATCAATGTGTTTTTCAGGTTGGAACTG
GTTGTTGTAGATGAGCTGAACCACTCCATTCTTGTCAAGAACGTAAGTCT
GTCTCCCAGGCAATGATCCAAAGAAGTCTGCTGGAACCCCCCATTCTTTC
CTCACCTTGTTACCCTCGTCGCTCAGCAATGTATATGGAAGCCTATACTT
TTTTGCAAATGCCTTGTGTGACGATGAATCATCACCACTAATCCCAATAA
CCTCAGCTCCTGCTTTCTTAAATTTCTCATAAGAATCCCTAAAAGCGCAT
GCCTGTTTGGTGCAGCCAGGTGTCTCATCAGCAGGGTAAAAATAAACAAC
CACGGGCTTCCCTTTAAACTTGGATAGGCTCACATTCCTGCCCTCTTGAT
CTTTCAATGTGAAGGAAGGAGGCGCCTGTCCTTTGCTCACCTTGGCAGAA
ATGGAAGTCTTGAAAGATGTGGAAGATGGGATTGGCAAGTTGG
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