DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:41..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C78AB_ORYSJ (Cytochrome P450 78A11 OS=Oryza sativa subsp. japonica GN=CYP78A11 PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 3.142e-24
Identity = 60/154 (38.96%), Postives = 88/154 (57.14%), Query Frame = -1
Query:   93 KLKYLDAVVKESFRLHPALPLLVPRR--ASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGT-KLNLSEKFGIVIKKKEPLVAIPTPR 545
            ++ YL AVVKE+ R HP  PLL   R   ++ G   G  +P  TT M+N+WAI  D ++W +P  F PERF+     +  D  G + +  PFG+GRR+C G  L    +   +A L+H+F+W LP G+  ++L E   + ++ K PL A  TPR
Sbjct:  397 RMPYLQAVVKETLRAHPPGPLLSWARLATADVGLANGMVVPAGTTAMVNMWAITHDGEVWADPEAFAPERFIPSEGGADVDVRGGDLRLAPFGAGRRVCPGKNLGLATVTLWVARLVHAFDWFLPDGSPPVSLDEVLKLSLEMKTPLAAAATPR 550          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP17A_RANDY (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana dybowskii GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 5.925e-23
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = -1
Query:  123 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL-NLSEKFGIVIKKK 542
            L Y +A + E  R+ P  PLL+P  A +  SIG YTIPK+  +++N+W++H D + W NP  F P+RFL+      +  S +   +LPFG+G R+C G  LA+  +   L+ +L  F  E+P G  L +L  KFG+VI+ K
Sbjct:  363 LHYTEAAISEVLRIRPVSPLLIPHVALKESSIGEYTIPKEARVVINLWSLHHDEKEWVNPHLFSPDRFLDENGNRVYSPSPS---FLPFGAGIRVCLGEALAKMEVFLFLSWILQRFTLEVPEGDPLPDLEGKFGVVIQVK 500          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP17A_ICTPU (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalurus punctatus GN=cyp17a1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.738e-23
Identity = 56/142 (39.44%), Postives = 82/142 (57.75%), Query Frame = -1
Query:  120 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL-NLSEKFGIVIKKKE 542
            L YL+A ++E  R+ P  PLL+P  A    +IG YT+ K T +++N+W++H D + W NP  F PERFLN   E        +  YLPFG+G R+C G  LA+  L   L+ +L  F  E+P G  L  L  KF +V++ ++
Sbjct:  353 LPYLEATIREVLRIRPVSPLLIPHVALSDANIGEYTVQKGTRVIVNLWSLHHDEKEWKNPELFNPERFLN---EEGNSLCCPSLSYLPFGAGVRVCLGEALAKLELFLFLSWILQRFTLEVPGGQPLPELQGKFRVVLQPQK 491          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C79A2_ARATH (Phenylalanine N-hydroxylase OS=Arabidopsis thaliana GN=CYP79A2 PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 7.738e-23
Identity = 56/156 (35.90%), Postives = 88/156 (56.41%), Query Frame = -1
Query:   87 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEW-ELPAGTKLNLSEKFGIVIKKKEPLVAIPTPRLS 551
            LP L Y+ A VKE+FRLHP  P  +P  ++    + GY IPK + ++++   I R+P +WD P +F PER L+    +  D + ++   + F +GRR C G+ +   M   +LA L+  F W  +P   K+++SE    +   K PL A+ TPRL+
Sbjct:  371 LPNLNYVKACVKEAFRLHPVAPFNLPHMSTTDTVVDGYFIPKGSHVLISRMGIGRNPSVWDKPHKFDPERHLS--TNTCVDLNESDLNIISFSAGRRGCMGVDIGSAMTYMLLARLIQGFTWLPVPGKNKIDISESKNDLFMAK-PLYAVATPRLA 523          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP17A_CHICK (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus gallus GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.011e-22
Identity = 57/141 (40.43%), Postives = 80/141 (56.74%), Query Frame = -1
Query:  129 PKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL-NLSEKFGIVIK 548
            P L YL+A + E  R+ P  PLL+P  +    SIG Y+IPK   +++N+W++H D + WD P EF P RFL+   E        +  YLPFG+G R+C G  LA+  L   LA +L  F  E P    L +L  KFG+V++
Sbjct:  351 PLLPYLEATISEGLRIRPVSPLLIPHVSLADTSIGEYSIPKGARVVINLWSVHHDEKEWDKPEEFNPGRFLD---EQGQHIHSPSPSYLPFGAGIRVCLGEVLAKMELFLFLAWVLQRFTLECPQDQPLPSLEGKFGVVLQ 488          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP17A_PERLE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromyscus leucopus GN=Cyp17a1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 1.724e-22
Identity = 51/127 (40.16%), Postives = 76/127 (59.84%), Query Frame = -1
Query:  162 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 542
            L  L+A ++E  R+ P  P+L+P +A+   SIG +TIPKDT +++N+WA+H + + WD P  F PERFL+         S     YLPFG+G R C G  LA ++L   +A LL  F+ ++P G  +
Sbjct:  348 LLMLEATIREVLRIRPVAPMLIPHKANIDSSIGEFTIPKDTHVVINLWALHHNEKEWDQPDRFMPERFLDATGSHLITPS---LSYLPFGAGPRACIGEVLARQVLFLYVACLLQRFDLDVPDGAPM 471          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP17A_CAVPO (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia porcellus GN=CYP17A1 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.941e-22
Identity = 52/132 (39.39%), Postives = 77/132 (58.33%), Query Frame = -1
Query:  162 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNF-----QYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 542
            L  L+A ++E  R+ P  P+L+P +A+   SIG + I KDT +++N+WA+H + Q WD P +F PERFL        D +G+        YLPFG+G R C G  LA + +  + A LL  F+ E+P G +L
Sbjct:  350 LLMLEATIREVLRIRPVAPILIPHKANTDSSIGEFAIDKDTNVLVNLWALHHNEQEWDRPDQFMPERFL--------DPTGSQIIVPSSSYLPFGAGPRSCVGEALARQEIFLITAWLLQKFDLEVPEGGQL 473          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C75AK_ARATH (Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=CYP705A20 PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.941e-22
Identity = 62/163 (38.04%), Postives = 92/163 (56.44%), Query Frame = -1
Query:   75 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLVAIPTPR----LSNSEL 551
            LPKL YL +VVKE  RLHP LPL+V R    S  + G+ I + TTL++N +A+ RDP  W++P EF+PERFL    E +        +++ FGSGRR C G  LA   +   + +++  F+  +  G K+ + E  G+ +    PL  I  PR    +SN ++
Sbjct:  353 LPKLPYLQSVVKEGLRLHPPLPLMV-RTFQRSCEMKGFYIAEKTTLVVNAYAVMRDPTTWEDPDEFKPERFLRQEEERR------ALKHIAFGSGRRGCPGSNLATIFIGTAIGTMVQCFDLSI-KGDKVKMDEVGGLNLTMAHPLECILVPRTQPFISNQQI 507          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C78A1_MAIZE (Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.016e-22
Identity = 60/154 (38.96%), Postives = 84/154 (54.55%), Query Frame = -1
Query:   93 KLKYLDAVVKESFRLHPALPLLVPRRASESGS--IGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG-TKLNLSEKFGIVIKKKEPLVAIPTPR 545
            ++ YL AVVKE+ R HP  PLL   R + +      G  +P  TT M+N+WAI  D  +W +P  F PERFL     +  D  G + +  PFG+GRR+C G  L    +   +A L+H+F+W LP G   + L E   + ++ K PLVA   PR
Sbjct:  392 RMPYLQAVVKETLRAHPPGPLLSWARLATADVPLCNGMVVPAGTTAMVNMWAITHDAAVWADPDAFAPERFLPSEGGADVDVRGVDLRLAPFGAGRRVCPGKNLGLTTVGLWVARLVHAFQWALPDGAAAVCLDEVLKLSLEMKTPLVAAAIPR 545          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2U1_BOVIN (Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.556e-22
Identity = 51/141 (36.17%), Postives = 82/141 (58.16%), Query Frame = -1
Query:  132 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQ---YLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVI 545
            ++ Y +A + E  RL   +PL +P   SE   + G+TIPK T ++ N+W++HRDP +W+ P +F P+RFL        D  G   +   ++PFG G+R+C G  LA+  L  +  SL+ SF + LP  +K  L+ K+G+ +
Sbjct:  399 QMPYTEATIMEVQRLSTVVPLSIPHMTSEKTVLQGFTIPKGTIILPNLWSVHRDPAIWEKPNDFYPDRFL--------DDQGQLIKKETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFTFVLPKDSKPILTGKYGLTL 531          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
C78AB_ORYSJ3.142e-2438.96Cytochrome P450 78A11 OS=Oryza sativa subsp. japon... [more]
CP17A_RANDY5.925e-2339.72Steroid 17-alpha-hydroxylase/17,20 lyase OS=Rana d... [more]
CP17A_ICTPU7.738e-2339.44Steroid 17-alpha-hydroxylase/17,20 lyase OS=Ictalu... [more]
C79A2_ARATH7.738e-2335.90Phenylalanine N-hydroxylase OS=Arabidopsis thalian... [more]
CP17A_CHICK1.011e-2240.43Steroid 17-alpha-hydroxylase/17,20 lyase OS=Gallus... [more]
CP17A_PERLE1.724e-2240.16Steroid 17-alpha-hydroxylase/17,20 lyase OS=Peromy... [more]
CP17A_CAVPO2.941e-2239.39Steroid 17-alpha-hydroxylase/17,20 lyase OS=Cavia ... [more]
C75AK_ARATH2.941e-2238.04Cytochrome P450 705A20 OS=Arabidopsis thaliana GN=... [more]
C78A1_MAIZE5.016e-2238.96Cytochrome P450 78A1 OS=Zea mays GN=CYP78A1 PE=2 S... [more]
CP2U1_BOVIN8.556e-2236.17Cytochrome P450 2U1 OS=Bos taurus GN=CYP2U1 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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