DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:41..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C79B3_ARATH (Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana GN=CYP79B3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 8.556e-22
Identity = 57/161 (35.40%), Postives = 94/161 (58.39%), Query Frame = -1
Query:   72 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG-TKLNLSEKFGIVIKKKEPLVAIPTPRLSNSELY 551
            +PKL Y+ A+++E+FRLHP     +P  A    ++ GY IPK + ++L+ + + R+P++W +PL F+PER LN    S+   + N+ +++ F +G+R CA   L   +   +LA LL  F+W+L    T++ L E    +   K PLV +   RLS  +LY
Sbjct:  383 IPKLNYVKAIIREAFRLHPVAAFNLPHVALSDTTVAGYHIPKGSQVLLSRYGLGRNPKVWSDPLSFKPERHLNEC--SEVTLTENDLRFISFSTGKRGCAAPALGTAITTMMLARLLQGFKWKLAGSETRVELMESSHDMFLSK-PLVLVGELRLS-EDLY 539          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C79B1_SINAL (Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.459e-21
Identity = 55/155 (35.48%), Postives = 90/155 (58.06%), Query Frame = -1
Query:   90 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG-TKLNLSEKFGIVIKKKEPLVAIPTPRL 551
            +PKL Y+ A+++E+FRLHP     +P  A    ++ GY IPK + ++L+ + + R+P++W +PL F+PER LN    S+   + N+ +++ F +G+R CA   L   +   +LA LL  F W+LP   T++ L E    +   K PLV +   RL
Sbjct:  382 IPKLNYVKAILREAFRLHPVAAFNLPHVALSDATVAGYHIPKGSQVLLSRYGLGRNPKVWADPLSFKPERHLNEC--SEVTLTENDLRFISFSTGKRGCAAPALGTALTTMLLARLLQGFTWKLPENETRVELMESSHDMFLAK-PLVMVGELRL 533          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP17A_SQUAC (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalus acanthias GN=CYP17A1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.489e-21
Identity = 57/139 (41.01%), Postives = 80/139 (57.55%), Query Frame = -1
Query:  129 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSE-KFGIVIK 542
            + +L+A + E  R+ P  PLL+P  A    SIG YTIPK T +++N+WAIH D + W NP  F P RFL+   + K+  S +   YLPFG+G R+C G  LA   L    + +L  F  ++P G      E KFGIV++
Sbjct:  353 MNFLNATIHEILRIQPVSPLLIPHVALADSSIGDYTIPKGTRVIINLWAIHHDEKEWKNPDAFDPGRFLD--EDGKYVCSSSE-SYLPFGAGTRVCLGEMLARMELFLFTSWILQRFTVQVPPGYPPPDKEGKFGIVLQ 488          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP1A1_SPAAU (Cytochrome P450 1A1 OS=Sparus aurata GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.251e-21
Identity = 50/142 (35.21%), Postives = 78/142 (54.93%), Query Frame = -1
Query:  123 PKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKK 548
            PKL +L+A + E FR    LP  +P  +S+  S+ GY IPKDT + +N W I+ DP+LW +P  F P+RFLN          G   + + FG G+R C G  +A   +   LA L+ +  +    G  L+++ ++G+ +K K
Sbjct:  368 PKLPFLEAFILEIFRHSSFLPFTIPHCSSKDTSLNGYFIPKDTCVFINQWQINHDPELWKDPSSFNPDRFLNTDGTELNKLEGE--KMMVFGLGKRRCIGEVIARNEVFLFLAILVQNLRFHAKPGEPLDMTPEYGLTMKHK 507          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP17A_MOUSE (Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus musculus GN=Cyp17a1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.246e-21
Identity = 51/126 (40.48%), Postives = 74/126 (58.73%), Query Frame = -1
Query:  180 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNF-----QYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWEL 542
            L  L+A ++E  R+ P  PLL+P +A+   SIG + IPKDT +++N+WA+H D   WD P  F PERFL        D +G++       YLPFG+G R C G  LA + L   +A LL  F++++
Sbjct:  349 LLMLEATIREVLRIRPVAPLLIPHKANIDSSIGEFAIPKDTHVIINLWALHHDKNEWDQPDRFMPERFL--------DPTGSHLITPTPSYLPFGAGPRSCIGEALARQELFIFMALLLQRFDFDV 466          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C79A1_SORBI (Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP79A1 PE=1 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 4.246e-21
Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = -1
Query:   90 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTK-LNLSEKFGIVIKKKEPLVAIPTPRL 551
            +PKL Y+ A ++E+FRLHP  P  VP  A    +I GY +PK + ++L+   + R+P++WD PL F P+R L     S    + N+ +++ F +GRR C    L   M + +   LL  F W  PAG + ++LSE          PLV    PRL
Sbjct:  396 IPKLNYVKACIREAFRLHPVAPFNVPHVALADTTIAGYRVPKGSHVILSRTGLGRNPRVWDEPLRFYPDRHLATAA-SDVALTENDLRFISFSTGRRGCIAASLGTAMSVMLFGRLLQGFTWSKPAGVEAVDLSESKSDTF-MATPLVLHAEPRL 548          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 4.246e-21
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = -1
Query:   99 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWD-NPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG----TKLNLSEKFGIVIKKKEPLVAIPT 545
            K+ YL  V+KE  RLHP+ PLL  R  SE   + GY I   T +++N WA+ R+P +W  +  E+RPER        +F +   + +++PFG+GRR+C GI  +  +    LA+L+  F W L  G     K +L+E  GI + +K PL+  P+
Sbjct:  346 KMNYLHCVIKEGLRLHPSGPLLF-RLPSEDVQLKGYDISAGTHVIINAWALQRNPAIWGLDANEYRPERHFWY----EFGFQRTDSKFVPFGAGRRLCPGIGFSLVLSKLALANLVKRFNWRLKVGPVGDDKPDLAEASGIDVCRKFPLIVFPS 494          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2U1_HUMAN (Cytochrome P450 2U1 OS=Homo sapiens GN=CYP2U1 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 5.546e-21
Identity = 52/142 (36.62%), Postives = 82/142 (57.75%), Query Frame = -1
Query:  132 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQ---YLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLN-LSEKFGIVI 545
            ++ Y +A + E  RL   +PL +P   SE+  + GYTIPK T ++ N+W++HRDP +W+ P +F P RFL        D  G   +   ++PFG G+R+C G  LA+  L  +  SL+ SF + LP  +K   L+ +FG+ +
Sbjct:  399 QMPYTEATIMEVQRLTVVVPLAIPHMTSENTVLQGYTIPKGTLILPNLWSVHRDPAIWEKPEDFYPNRFL--------DDQGQLIKKETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQSFAFALPEDSKKPLLTGRFGLTL 532          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2U1_MOUSE (Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 7.243e-21
Identity = 50/142 (35.21%), Postives = 83/142 (58.45%), Query Frame = -1
Query:  132 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQ---YLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGT-KLNLSEKFGIVI 545
            ++ Y +A + E  RL   +PL +P   SE   + G+TIPK T +++N+W++HRDP +W+ P +F P RFL        D  G   +   ++PFG G+R+C G  LA+  L  +  SL+ +F + LP G+ K  ++ +FG+ +
Sbjct:  385 QMPYTEATIMEVQRLSMVVPLAIPHMTSEKTVLQGFTIPKGTVVLINLWSVHRDPAIWEKPDDFCPHRFL--------DDQGQLLKRETFIPFGIGKRVCMGEQLAKMELFLMFVSLMQTFTFALPEGSEKPVMTGRFGLTL 518          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP1A2_HUMAN (Cytochrome P450 1A2 OS=Homo sapiens GN=CYP1A2 PE=1 SV=3)

HSP 1 Score: 100.138 bits (248), Expect = 7.243e-21
Identity = 49/140 (35.00%), Postives = 80/140 (57.14%), Query Frame = -1
Query:  129 PKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIK 548
            P+L YL+A + E+FR    LP  +P   +   ++ G+ IPK   + +N W ++ DP+LW++P EFRPERFL    +        + + + FG G+R C G  LA+  +   LA LL   E+ +P G K++L+  +G+ +K
Sbjct:  363 PQLPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLT--ADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVDLTPIYGLTMK 500          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
C79B3_ARATH8.556e-2235.40Tryptophan N-hydroxylase 2 OS=Arabidopsis thaliana... [more]
C79B1_SINAL1.459e-2135.48Cytochrome P450 79B1 OS=Sinapis alba GN=CYP79B1 PE... [more]
CP17A_SQUAC2.489e-2141.01Steroid 17-alpha-hydroxylase/17,20 lyase OS=Squalu... [more]
CP1A1_SPAAU3.251e-2135.21Cytochrome P450 1A1 OS=Sparus aurata GN=cyp1a1 PE=... [more]
CP17A_MOUSE4.246e-2140.48Steroid 17-alpha-hydroxylase/17,20 lyase OS=Mus mu... [more]
C79A1_SORBI4.246e-2136.13Tyrosine N-monooxygenase OS=Sorghum bicolor GN=CYP... [more]
C71AR_ARATH4.246e-2137.01Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]
CP2U1_HUMAN5.546e-2136.62Cytochrome P450 2U1 OS=Homo sapiens GN=CYP2U1 PE=1... [more]
CP2U1_MOUSE7.243e-2135.21Cytochrome P450 2U1 OS=Mus musculus GN=Cyp2u1 PE=2... [more]
CP1A2_HUMAN7.243e-2135.00Cytochrome P450 1A2 OS=Homo sapiens GN=CYP1A2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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