DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2F3_CAPHI (Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.120e-13
Identity = 39/118 (33.05%), Postives = 63/118 (53.39%), Query Frame = -1
Query:  192 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 545
            ++ Y DAV+ E  R    +P+ +P R +   +  G+TIP+ T ++  +  +H DP  +  P EF PE FL+  +  K      +  ++PF +GRR+C G  LA   L   L ++L SF
Sbjct:  345 EMPYTDAVIHEVQRFADIIPMSLPHRVTRDTNFRGFTIPRGTDVITLLNTVHYDPSQFLKPKEFNPEHFLDANMSFK-----KSPAFMPFSAGRRLCLGEALARMELFLYLTAILQSF 457          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C13B1_CAEEL (Putative cytochrome P450 cyp-13B1 OS=Caenorhabditis elegans GN=cyp-13B1 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.120e-13
Identity = 45/145 (31.03%), Postives = 73/145 (50.34%), Query Frame = -1
Query:  120 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLW-DNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKE 551
            + KLKYLDAVV+ES RL+P       R   +  ++G   I K   +  +V ++HR  ++W +N  +F PER+L          S +   ++PFG+G R C G+ L        LA LL  ++      T++ L+ +F  + K  +
Sbjct:  364 MTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDIYIDKGVKIEADVMSLHRSKEIWGENADDFVPERWLEPS-------SRHTMSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRYDLVAGVETEVRLTLRFFFIFKSSQ 501          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: THAS_HUMAN (Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.463e-13
Identity = 49/146 (33.56%), Postives = 71/146 (48.63%), Query Frame = -1
Query:  129 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWE--------LPAGTKLNLSEKFGIVIK 542
            L YLD V+ E+ R++P       R A++   + G  IP    L + V A+H DP+ W +P  F PERF     E++  +    F YLPFG+G R C G+ L    +   L  +LH F ++        L   +K  L  K G+ IK
Sbjct:  390 LPYLDMVIAETLRMYPPA-FRFTREAAQDCEVLGQRIPAGAVLEMAVGALHHDPEHWPSPETFNPERFT---AEARQQH--RPFTYLPFGAGPRSCLGVRLGLLEVKLTLLHVLHKFRFQACPETQVPLQLESKSALGPKNGVYIK 529          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP4C1_BLADI (Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP4C1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13
Identity = 42/121 (34.71%), Postives = 64/121 (52.89%), Query Frame = -1
Query:  189 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 551
            L  +KYL+ V+KES RL P++P  + R   E   IG Y +P    + L ++ +HR+   + NP  F P+ FL   V  +  Y+     Y+PF +G R C G   A      VL+S+L +F+
Sbjct:  360 LADMKYLERVIKESLRLFPSVPF-IGRVLKEDTKIGDYLVPAGCMMNLQIYHVHRNQDQYPNPEAFNPDNFLPERVAKRHPYA-----YVPFSAGPRNCIGQKFATLEEKTVLSSILRNFK 474          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP10_LYMST (Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13
Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = -1
Query:  192 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 551
            L KL  + AVVKE+ RL+P +     R  +E   +GGYTIP  T +  N++ ++RDP L+  P    PER+L +   S+ D +  +   L +G G RMC G  +AE+ +   L+ ++ +F
Sbjct:  397 LCKLPMVKAVVKETLRLYP-ITYSTSRNIAEDMELGGYTIPAGTHVQANLYGMYRDPSLFPEPEGILPERWLRMN-GSQMDATIKSTSQLVWGHGARMCLGRRIAEQEMHITLSKIIQNF 514          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C513C_DICDI (Probable cytochrome P450 513C1 OS=Dictyostelium discoideum GN=cyp513c1 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13
Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = -1
Query:  105 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLVAI 542
            + YL  VVKE FR++PA  L +P   SE   I G+ I K T ++ N+++ HR    W NP  F PER +   V             + F  G R C G+ L+E  +   +A L  +F++  P+   LN    F + +   +  V I
Sbjct:  356 IPYLALVVKEVFRMYPAGILGLPHMTSEDCEIQGHKIAKGTQIIQNIYSTHRSESFWPNPNNFIPERHIQNDVSKS----------VHFAVGTRNCMGMSLSEAEVHTAMAELFGNFKFTNPSNIPLNDQGTFSVALNCPDFFVKI 491          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C5133_DICDI (Probable cytochrome P450 513A3 OS=Dictyostelium discoideum GN=cyp513a3 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.910e-13
Identity = 46/136 (33.82%), Postives = 72/136 (52.94%), Query Frame = -1
Query:  138 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGT-KLNLSEKFGI 542
            L Y+  ++KE+FR HP   L +P   +E   I GY I   T ++ N+++ HR  +++ +P EF PERF           S  N   + FG G R C G  LAE  +  ++A+LL+ +++  P  + KLN    FG+
Sbjct:  351 LPYISMIIKETFRKHPIALLGLPHVTTEDVEIDGYKIEAGTYIIQNIFSSHRSDKIFQSPNEFIPERFFE---------SSQNQGLIHFGLGVRDCVGKSLAECEIFTLIATLLNRYQFINPNNSKKLNDIGTFGL 477          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CPXB_BACME (Bifunctional P-450/NADPH-P450 reductase OS=Bacillus megaterium GN=CYP102A1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 3.259e-13
Identity = 56/165 (33.94%), Postives = 79/165 (47.88%), Query Frame = -1
Query:   81 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGG-YTIPKDTTLMLNVWAIHRDPQLW-DNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKF-----GIVIK---KKEPLVAIPTPRLSNS 545
            +LKY+  V+ E+ RL P  P      A E   +GG Y + K   LM+ +  +HRD  +W D+  EFRPERF N     +  +        PFG+G+R C G   A      VL  +L  F++E     +L++ E       G V+K   KK PL  IP+P    S
Sbjct:  311 QLKYVGMVLNEALRLWPTAPAF-SLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQHAFK-------PFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGGIPSPSTEQS 467          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2F5_GORGO (Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=CYP2F5 PE=3 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.256e-13
Identity = 43/126 (34.13%), Postives = 63/126 (50.00%), Query Frame = -1
Query:  192 LPKLK------YLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 551
            LP LK      Y DAV+ E  R    +P+ +P R +   +  G+ IPK T ++  +  +H DP  +  P EF PE FL+     K      +  ++PF +GRR+C G  LA   L   L ++L SF
Sbjct:  337 LPALKDRAAMPYTDAVIHEVQRFADIIPMSLPHRVTRDTAFRGFLIPKGTDIITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFK-----KSPAFMPFSAGRRLCLGESLARMELFLYLTAILQSF 457          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2DA_MOUSE (Cytochrome P450 2D10 OS=Mus musculus GN=Cyp2d10 PE=2 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 4.256e-13
Identity = 42/128 (32.81%), Postives = 64/128 (50.00%), Query Frame = -1
Query:  171 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQ---YLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 545
            ++ Y +AV+ E  R     PL +PR  S    +  + IPK + L+ N+ ++ +D  +W+ PL F PE FL        D  G+  +   ++PF +GRR C G PLA   L      LL  F + +P G
Sbjct:  355 RMPYTNAVIHEVQRFGDIAPLNLPRITSRDIEVQDFLIPKGSILIPNMSSVLKDETVWEKPLRFHPEHFL--------DAQGHFVKPEAFMPFSAGRRSCLGEPLARMELFLFFTCLLQHFSFSVPNG 474          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
CP2F3_CAPHI1.120e-1333.05Cytochrome P450 2F3 OS=Capra hircus GN=CYP2F3 PE=2... [more]
C13B1_CAEEL1.120e-1331.03Putative cytochrome P450 cyp-13B1 OS=Caenorhabditi... [more]
THAS_HUMAN1.463e-1333.56Thromboxane-A synthase OS=Homo sapiens GN=TBXAS1 P... [more]
CP4C1_BLADI1.910e-1334.71Cytochrome P450 4C1 OS=Blaberus discoidalis GN=CYP... [more]
CP10_LYMST1.910e-1335.83Cytochrome P450 10 OS=Lymnaea stagnalis GN=CYP10 P... [more]
C513C_DICDI1.910e-1331.51Probable cytochrome P450 513C1 OS=Dictyostelium di... [more]
C5133_DICDI1.910e-1333.82Probable cytochrome P450 513A3 OS=Dictyostelium di... [more]
CPXB_BACME3.259e-1333.94Bifunctional P-450/NADPH-P450 reductase OS=Bacillu... [more]
CP2F5_GORGO4.256e-1334.13Cytochrome P450 2F5 OS=Gorilla gorilla gorilla GN=... [more]
CP2DA_MOUSE4.256e-1332.81Cytochrome P450 2D10 OS=Mus musculus GN=Cyp2d10 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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