DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:41..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: THAS_PIG (Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.559e-13
Identity = 49/146 (33.56%), Postives = 69/146 (47.26%), Query Frame = -1
Query:  129 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWE--------LPAGTKLNLSEKFGIVIK 542
            L YLD V+ E+ R++P       R A+    + G  IP  T L + V A+H DP+ W +P  F PERF      ++       F YLPFG+G R C G+ L    +   L  +L  F +E        L   +K  LS K G+ I+
Sbjct:  391 LPYLDMVLSETLRMYPPA-FRFTREAARDCEVLGQRIPAGTVLEVAVGALHHDPKHWPHPETFDPERF-----TAEAQRLQQPFTYLPFGAGPRSCLGVQLGLLEIKLTLLHILRKFRFEACPETQVPLQLESKSALSPKNGVYIR 530          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP4C3_DROME (Cytochrome P450 4c3 OS=Drosophila melanogaster GN=Cyp4c3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.559e-13
Identity = 43/153 (28.10%), Postives = 82/153 (53.59%), Query Frame = -1
Query:   93 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLVAIPTPR 551
            L  ++YL+  +K+S RL P++P++  R   E  +IGG  +P  T  ++  +A+HR+P+++  P +F P+ FL      +     + F Y+PF +G R C G   A      V++++L  ++ E     + +L+    ++++ K+ L    TPR
Sbjct:  389 LMDMRYLECCIKDSLRLFPSVPMMA-RMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQFNPDNFLPENCAGR-----HPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIE-AVDRREDLTLLGELILRPKDGLRVKITPR 534          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2DQ_MOUSE (Cytochrome P450 2D26 OS=Mus musculus GN=Cyp2d26 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.559e-13
Identity = 40/125 (32.00%), Postives = 62/125 (49.60%), Query Frame = -1
Query:  171 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 545
            ++ Y +AV+ E  R    +P  +P   S       + IPK TTL+ N+ ++ +D  +W+ PL F PE FL+        +   +  ++PF +GRR C G PLA   L      LL  F + +P G
Sbjct:  355 RMPYTNAVIHEVQRFADIVPTNLPHMTSRDIKFQDFFIPKGTTLIPNLSSVLKDETVWEKPLRFYPEHFLDAQ-----GHFVKHEAFMPFSAGRRSCLGEPLARMELFLFFTCLLQRFSFSVPDG 474          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2S1_HUMAN (Cytochrome P450 2S1 OS=Homo sapiens GN=CYP2S1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 41/123 (33.33%), Postives = 68/123 (55.28%), Query Frame = -1
Query:  177 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 545
            +L Y DAV+ E+ RL   +P+ +PR    +    GYT+P+ T +   + +I  DP ++ +P EF P+RFL+   + +F     +  +LPF  G+R+C G  LA+  L     ++L +F  E P
Sbjct:  349 RLPYTDAVLHEAQRLLALVPMGIPRTLMRTTRFRGYTLPQGTEVFPLLGSILHDPNIFKHPEEFNPDRFLD--ADGRF---RKHEAFLPFSLGKRVCLGEGLAKAELFLFFTTILQAFSLESP 466          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2F1_HUMAN (Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 43/126 (34.13%), Postives = 63/126 (50.00%), Query Frame = -1
Query:  192 LPKLK------YLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 551
            LP LK      Y DAV+ E  R    +P+ +P R +   +  G+ IPK T ++  +  +H DP  +  P EF PE FL+     K      +  ++PF +GRR+C G  LA   L   L ++L SF
Sbjct:  337 LPALKDRAAMPYTDAVIHEVQRFADIIPMNLPHRVTRDTAFRGFLIPKGTDVITLLNTVHYDPSQFLTPQEFNPEHFLDANQSFK-----KSPAFMPFSAGRRLCLGESLARMELFLYLTAILQSF 457          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2DP_PIG (Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D25 PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 41/119 (34.45%), Postives = 61/119 (51.26%), Query Frame = -1
Query:  171 AVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 527
            AV+ E  R    +PL V    S    + G+ IPK TTL+ N+ ++ +D  +W  P  F PE FL+   + +F        ++PF +GRR C G PLA   L     +LL +F + +P G
Sbjct:  361 AVLHEVQRFGDIVPLGVAHMTSCDIEVQGFLIPKGTTLITNLTSVLKDETVWKKPFRFYPEHFLD--AQGRFT---KQEAFMPFSAGRRSCLGEPLARMELFLFFTTLLQAFSFSVPTG 474          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP24A_HUMAN (1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial OS=Homo sapiens GN=CYP24A1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 45/146 (30.82%), Postives = 73/146 (50.00%), Query Frame = -1
Query:  114 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPL 551
            L  + YL A +KES RL P++P    R   ++  +G Y +PK T LMLN   +      +++  +FRPER+L    +       N F +LPFG G+RMC G  LAE  L   L  ++  ++ +      + +     +V  ++ P+
Sbjct:  371 LRNMPYLKACLKESMRLTPSVPFTT-RTLDKATVLGEYALPKGTVLMLNTQVLGSSEDNFEDSSQFRPERWLQEKEKI------NPFAHLPFGVGKRMCIGRRLAELQLHLALCWIVRKYDIQATDNEPVEMLHSGTLVPSRELPI 509          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C4AA1_DROME (Probable cytochrome P450 4aa1 OS=Drosophila melanogaster GN=Cyp4aa1 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 7.260e-13
Identity = 40/141 (28.37%), Postives = 79/141 (56.03%), Query Frame = -1
Query:  129 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIK 551
            L +++Y++  +KE+ RL+P++PL+  R+  E   +  +T+P  + + +  +A HR   ++ +P +F+PERF     E++  Y+     +LPF +G R C G   A   +  +++ LL S++  LP   K  ++  F I ++
Sbjct:  358 LHEMRYMEMCIKEALRLYPSVPLIA-RKLGEEVRLAKHTLPAGSNVFICPYATHRLAHIYPDPEKFQPERFSPENSENRHPYA-----FLPFSAGPRYCIGNRFAIMEIKTIVSRLLRSYQL-LPVTGKTTIAATFRITLR 491          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2E1_RABIT (Cytochrome P450 2E1 OS=Oryctolagus cuniculus GN=CYP2E1 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 42/118 (35.59%), Postives = 66/118 (55.93%), Query Frame = -1
Query:  192 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 545
            ++ Y+DAVV E  R    +P  +P  A+   +  GY IPK T ++  + ++  D Q + +P +F+PE FLN   E KF YS     + PF +G+R+C G  LA   L  +L+++L  F
Sbjct:  346 QMPYMDAVVHEIQRFIDLVPSNLPHEATRDTTFQGYVIPKGTVVIPTLDSLLYDKQEFPDPEKFKPEHFLN--EEGKFKYSD---YFKPFSAGKRVCVGEGLARMELFLLLSAILQHF 458          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP27B_HUMAN (25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial OS=Homo sapiens GN=CYP27B1 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 49/121 (40.50%), Postives = 63/121 (52.07%), Query Frame = -1
Query:  189 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 551
            L +L  L AVVKE  RL+P +P    R   +   +G Y IPK+T + L  +A  RDP  +  P  FRP R+L  G       + + F  LPFG G+R C G  LAE  L   LA +L  FE
Sbjct:  364 LSQLPLLKAVVKEVLRLYPVVPGN-SRVPDKDIHVGDYIIPKNTLVTLCHYATSRDPAQFPEPNSFRPARWLGEGP------TPHPFASLPFGFGKRSCMGRRLAELELQMALAQILTHFE 477          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
THAS_PIG5.559e-1333.56Thromboxane-A synthase OS=Sus scrofa GN=TBXAS1 PE=... [more]
CP4C3_DROME5.559e-1328.10Cytochrome P450 4c3 OS=Drosophila melanogaster GN=... [more]
CP2DQ_MOUSE5.559e-1332.00Cytochrome P450 2D26 OS=Mus musculus GN=Cyp2d26 PE... [more]
CP2S1_HUMAN7.260e-1333.33Cytochrome P450 2S1 OS=Homo sapiens GN=CYP2S1 PE=2... [more]
CP2F1_HUMAN7.260e-1334.13Cytochrome P450 2F1 OS=Homo sapiens GN=CYP2F1 PE=1... [more]
CP2DP_PIG7.260e-1334.45Vitamin D(3) 25-hydroxylase OS=Sus scrofa GN=CYP2D... [more]
CP24A_HUMAN7.260e-1330.821,25-dihydroxyvitamin D(3) 24-hydroxylase, mitocho... [more]
C4AA1_DROME7.260e-1328.37Probable cytochrome P450 4aa1 OS=Drosophila melano... [more]
CP2E1_RABIT9.482e-1335.59Cytochrome P450 2E1 OS=Oryctolagus cuniculus GN=CY... [more]
CP27B_HUMAN9.482e-1340.5025-hydroxyvitamin D-1 alpha hydroxylase, mitochond... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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