DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:41..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP131_DROME (Probable cytochrome P450 313a1 OS=Drosophila melanogaster GN=Cyp313a1 PE=3 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 38/122 (31.15%), Postives = 64/122 (52.46%), Query Frame = -1
Query:  189 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLE-FRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 551
            + KL YL+ V+KE+ RL PA+P+      ++     G  IPK   + ++++  HR+P++W    + F P+ FL   +E K  Y+     Y+PF  G+R C G   A     F L  +L +++
Sbjct:  344 MQKLDYLERVIKETLRLIPAIPITARETKNDVRLSNGVLIPKGVVIGIDMFHTHRNPEVWGPDADNFNPDNFLAENMEQKHPYA-----YIPFARGKRNCIGSKYAMMSSKFALCRILRNYK 460          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C513E_DICDI (Probable cytochrome P450 513E1 OS=Dictyostelium discoideum GN=cyp513e1 PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 9.482e-13
Identity = 45/135 (33.33%), Postives = 70/135 (51.85%), Query Frame = -1
Query:  138 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGI 542
            + YL  V+KE +RL+  + + +P   SE   I GY I K T ++ NV++ H   + +     F PERF+  G  + F   G     + FG+G R C G  LA+  +  VLA+L++ +++  P    LN    FGI
Sbjct:  357 IPYLSLVMKEVYRLYSVILIGLPHITSEDVEIEGYKIAKGTQIIQNVFSTHLCEKTFPMSKSFIPERFIETGSNNMF--GGGQTNLVHFGTGVRDCVGKSLADCEIFTVLATLINRYQFINPTLEPLNDIGSFGI 489          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2F2_RAT (Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.238e-12
Identity = 39/117 (33.33%), Postives = 58/117 (49.57%), Query Frame = -1
Query:  192 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 542
            + Y DAV+ E  R    +P+ +P R        G+ IPK T ++  +  +H D   +  P EF PE FL+     K      +  ++PF +GRR+C G PLA   L   L S+L +F
Sbjct:  346 MPYTDAVIHEVQRFADVIPMNLPHRVIRDTPFRGFLIPKGTDVITLLNTVHYDSDQFKTPQEFNPEHFLDANQSFK-----KSPAFMPFSAGRRLCLGEPLARMELFIYLTSILQNF 457          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP11A_DASAM (Cholesterol side-chain cleavage enzyme, mitochondrial (Fragment) OS=Dasyatis americana GN=CYP11A1 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.238e-12
Identity = 44/152 (28.95%), Postives = 81/152 (53.29%), Query Frame = -1
Query:   96 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLVAIPTP 551
            L  +  L  VVKE+ RL+P + + + R  +E   +  Y IP  T + L ++A+ R+P+++ NP ++ PER+L             +F++L FG G R C G  +AE  ++ ++  +L +F+ E    T+  +  KF +++   +P+    TP
Sbjct:  372 LKSVPLLKCVVKETLRLYP-VAISIQRYLNEDTVLQNYHIPAGTLVQLGLYAMGRNPKIFKNPEQYNPERWLK--------GEDTHFRHLGFGFGPRQCIGRRIAETQMVLLMIHMLQNFKIETDPMTE--VKSKFSLILIPDKPINLKFTP 512          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C508C_DICDI (Probable cytochrome P450 508C1 OS=Dictyostelium discoideum GN=cyp508c1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.238e-12
Identity = 43/142 (30.28%), Postives = 71/142 (50.00%), Query Frame = -1
Query:  132 PKLKYLDAVVKESFRLHPALPLLVPRRASESGSIG--GYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQ-YLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVI 548
            P   Y+ A++KE+ R+HP +   +PR       IG   Y IPK   + +N  +I  + + + +P +F P RFL        + S N+   + PFG G R+C G  LA   L  V+A+L+  ++ +     K+N    FG+ +
Sbjct:  350 PNTPYIQAIIKETMRMHPVVVFGLPRYCENDIFIGDENYFIPKGCKVFINFHSIGYNEKYFKDPYKFEPNRFL--------ENSNNSMDSFFPFGLGNRVCLGRQLANDQLYLVIANLILKYKLKTIDENKINEDGIFGLTV 483          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C4D14_DROME (Probable cytochrome P450 4d14 OS=Drosophila melanogaster GN=Cyp4d14 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.617e-12
Identity = 44/130 (33.85%), Postives = 73/130 (56.15%), Query Frame = -1
Query:  162 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 551
            L +LKYL+ V+KES RL P++P+ + R  S+   + G  IP D+ +++ ++   RDP  + +P +F P+RF    +E K + S   F Y PF +G R C G   A   +   ++ ++  FE  LP G ++
Sbjct:  362 LGELKYLECVIKESLRLFPSVPI-IGRYISQDTVLDGKLIPADSNVIILIYHAQRDPDYFPDPEKFIPDRF---SMERKGEIS--PFAYTPFSAGPRNCIGQKFAMLEMKSTISKMVRHFEL-LPLGEEV 484          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C27C1_HUMAN (Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.617e-12
Identity = 50/139 (35.97%), Postives = 71/139 (51.08%), Query Frame = -1
Query:  135 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIV 551
            +PK+  + A++KE+ RL P LP    R   E   IGGY IPK T L L  +A     + +    EFRPER+L  G   + D    NF  +PFG G R C G  +AE  +  V+  LL  FE +  + T    ++  G++
Sbjct:  225 VPKVPLVRALLKETLRLFPVLPGN-GRVTQEDLVIGGYLIPKGTQLALCHYATSYQDENFPRAKEFRPERWLRKGDLDRVD----NFGSIPFGHGVRSCIGRRIAELEIHLVVIQLLQHFEIKTSSQTNAVHAKTHGLL 358          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP4D1_DROME (Cytochrome P450 4d1 OS=Drosophila melanogaster GN=Cyp4d1 PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.112e-12
Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = -1
Query:  111 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLV 551
            L +L Y+D  VKE+ R++P++PLL  R+  E   I G  IP  T + ++   + R  +L+  P  F+PERF  V    K     N + Y+PF +G R C G   A   +  ++A++L  +E +    +         ++++ KEPL+
Sbjct:  363 LNQLHYVDLCVKETLRMYPSVPLL-GRKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNSFKPERFDVVTTAEKL----NPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELILRTKEPLM 504          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2S1_MOUSE (Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.112e-12
Identity = 41/123 (33.33%), Postives = 64/123 (52.03%), Query Frame = -1
Query:  177 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 545
            +L Y DAV+ E+ RL   +P+ +P   + +    GYT+PK T +   + +I  DP ++ NP EF P RFL+     +      +  +LP+  G+R+C G  LA   L     S+L +F  E P
Sbjct:  350 RLPYTDAVLHEAQRLLALVPMGMPHTITRTTCFRGYTLPKGTEVFPLIGSILHDPAVFQNPGEFHPGRFLDEDGRLR-----KHEAFLPYSLGKRVCLGEGLARAELWLFFTSILQAFSLETP 467          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2A1_RAT (Cytochrome P450 2A1 OS=Rattus norvegicus GN=Cyp2a1 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.112e-12
Identity = 38/123 (30.89%), Postives = 67/123 (54.47%), Query Frame = -1
Query:  177 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 545
            K+ Y  AV+ E  R     PL +PRR  ++ +  G+ +PK T +   + ++  DP+ + +P +F P+ FL+   + K      N  +LPF +G+R C G  LA+  L  +L ++L +F ++ P
Sbjct:  346 KMPYTQAVINEIQRFSNLAPLGIPRRIIKNTTFRGFFLPKGTDVFPILGSLMTDPKFFPSPKDFDPQNFLDDKGQLK-----KNAAFLPFSTGKRFCLGDGLAKMELFLLLTTILQNFRFKFP 463          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
CP131_DROME9.482e-1331.15Probable cytochrome P450 313a1 OS=Drosophila melan... [more]
C513E_DICDI9.482e-1333.33Probable cytochrome P450 513E1 OS=Dictyostelium di... [more]
CP2F2_RAT1.238e-1233.33Cytochrome P450 2F2 OS=Rattus norvegicus GN=Cyp2f2... [more]
CP11A_DASAM1.238e-1228.95Cholesterol side-chain cleavage enzyme, mitochondr... [more]
C508C_DICDI1.238e-1230.28Probable cytochrome P450 508C1 OS=Dictyostelium di... [more]
C4D14_DROME1.617e-1233.85Probable cytochrome P450 4d14 OS=Drosophila melano... [more]
C27C1_HUMAN1.617e-1235.97Cytochrome P450 27C1 OS=Homo sapiens GN=CYP27C1 PE... [more]
CP4D1_DROME2.112e-1230.61Cytochrome P450 4d1 OS=Drosophila melanogaster GN=... [more]
CP2S1_MOUSE2.112e-1233.33Cytochrome P450 2S1 OS=Mus musculus GN=Cyp2s1 PE=2... [more]
CP2A1_RAT2.112e-1230.89Cytochrome P450 2A1 OS=Rattus norvegicus GN=Cyp2a1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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