DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:41..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP4E5_DROMT (Cytochrome P450 4e5, mitochondrial OS=Drosophila mettleri GN=Cyp4e5 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.027e-12
Identity = 48/146 (32.88%), Postives = 77/146 (52.74%), Query Frame = -1
Query:  120 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL-----NLSEKFGIVIKKKE 542
            +KYLD  +KE+ R++P++P  + R   +  +I G  +PK TTL L +  +  D ++++ P  F PERF               F+Y+PF +G R C G   A   L  V++ L+ +FE  LPA  +L     NL+   G+  ++KE
Sbjct:  357 MKYLDLFIKEAQRVYPSVPF-IGRYTDKDYNIHGTIMPKGTTLNLGIIVLGYDDRVFEEPHRFYPERFEK--------QKPGPFEYVPFSAGPRNCIGQKFALLELKTVISKLVRTFE-VLPAVDELVSKDGNLNTYVGLPKEEKE 492          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP137_MYCTU (Putative cytochrome P450 137 OS=Mycobacterium tuberculosis GN=cyp137 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.027e-12
Identity = 39/117 (33.33%), Postives = 67/117 (57.26%), Query Frame = -1
Query:  186 YLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEW 536
            +  AV+ E+ R+ P  PL   R A++  +IGGY +   T +++++ AI+R  +++++P EFRPERFL    ++        + ++PFG G + C G   + R L+ VL  LL   E+
Sbjct:  338 FTTAVINETLRVRPPAPLTA-RVAAQPLTIGGYRVEAGTRIVVHIIAINRSAEVYEHPHEFRPERFLGTRPQT--------YAWVPFGGGVKRCLGANFSMRELITVLHVLLREGEF 445          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C525A_DICDI (Probable cytochrome P450 525A1 OS=Dictyostelium discoideum GN=cyp525a1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 8.027e-12
Identity = 39/129 (30.23%), Postives = 69/129 (53.49%), Query Frame = -1
Query:  189 LKYLDAVVKESFRLHPALPLLVPRRASESGSI-----------GGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 542
            +++LD V+ E+ RL P  P++   R S++  I              +IP +T ++++V+AIHRDP+LW +P  F P R+ N+      +   N   ++PF SG R+C G   +      +++ L+ +FE
Sbjct:  446 IEFLDWVIYETLRLFPPAPMI--GRTSKNDDILKSGNNNNNNNNNISIPSETLILISVYAIHRDPKLWKDPNIFNPYRWKNI------ENINNRSDFIPFSSGGRVCVGQKFSIVEARIIISKLILNFE 566          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C4AC3_DROME (Probable cytochrome P450 4ac3 OS=Drosophila melanogaster GN=Cyp4ac3 PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 8.027e-12
Identity = 42/142 (29.58%), Postives = 80/142 (56.34%), Query Frame = -1
Query:  120 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKE 545
            +L +L+ V+KES RL P+ P+ + R   E   + G  +PK+  + ++++ I RD + +  P +F PERFL      +   + + F ++PF +G R C G       +  +LA+++ +F+  LPA    +L+ + GIV++ ++
Sbjct:  364 ELIHLECVIKESLRLFPSAPI-IGRTCIEESVMNGLVLPKNAQISIHIYDIMRDARHFPKPNQFLPERFL-----PENSVNRHPFAFVPFSAGPRNCIGQKFGVLEIKVLLAAVIRNFKL-LPATQLEDLTFENGIVLRTQQ 498          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP6U1_DROME (Probable cytochrome P450 6u1 OS=Drosophila melanogaster GN=Cyp6u1 PE=2 SV=3)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 45/132 (34.09%), Postives = 67/132 (50.76%), Query Frame = -1
Query:  162 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGG--YTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 551
            L +L+Y   V+ E+ RLH   P L+ RRA++   + G  + I K   +++   AIH DP +++NP  F PERF     E +   S     +LPFG G R C     AE+ L+  L +LL    +   A T +
Sbjct:  336 LRELRYTKQVLNETLRLHTPHPFLL-RRATKEFEVPGSVFVIAKGNNVLIPTAAIHMDPGIYENPQRFYPERF-----EEQARRSRPAAAFLPFGDGLRGCIAARFAEQQLLVGLVALLRQHRYAPSAETSI 461          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP46A_MOUSE (Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp46a1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 47/153 (30.72%), Postives = 73/153 (47.71%), Query Frame = -1
Query:   93 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLVAIPTPR 551
            L +L+YL  V+KES RL+P       R   E   I G  +P +T L+ + + + R    +++PL F P+RF     + +F Y        PF  G R C G   A+  +  V+A LL   E+ L  G +  L E+    +K  +P++    PR
Sbjct:  347 LGRLQYLSQVLKESLRLYPPAWGTF-RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTY-------FPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIEFRLVPGQRFGLQEQ--ATLKPLDPVLCTLRPR 489          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP46A_HUMAN (Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP46A1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 47/153 (30.72%), Postives = 73/153 (47.71%), Query Frame = -1
Query:   93 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLVAIPTPR 551
            L +L+YL  V+KES RL+P       R   E   I G  +P +T L+ + + + R    +++PL F P+RF     + +F Y        PF  G R C G   A+  +  V+A LL   E+ L  G +  L E+    +K  +P++    PR
Sbjct:  347 LGRLQYLSQVLKESLRLYPPAWGTF-RLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRFGPGAPKPRFTY-------FPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPGQRFGLQEQ--ATLKPLDPVLCTLRPR 489          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2E1_MACMU (Cytochrome P450 2E1 OS=Macaca mulatta GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 41/118 (34.75%), Postives = 65/118 (55.08%), Query Frame = -1
Query:  192 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 545
            ++ Y+DAVV E  R    +P  +P  A+      GY IPK T ++  + ++  D Q + +P +F+PE FL+     KF YS     + PF +G+R+CAG  LA   L  +L+++L  F
Sbjct:  346 EMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYIIPKGTVIVPTLDSVLYDNQEFPDPEKFKPEHFLD--ESGKFKYSD---YFKPFSAGKRVCAGEGLARMELFLLLSAILQHF 458          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2B1_RAT (Cytochrome P450 2B1 OS=Rattus norvegicus GN=Cyp2b1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 37/118 (31.36%), Postives = 61/118 (51.69%), Query Frame = -1
Query:  192 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 545
            K+ Y DAV+ E  R    +P+ VP R ++     GY +PK+T +   + +   DPQ +D+P  F PE FL+     K      +  ++PF +G+R+C G  +A   L     ++L +F
Sbjct:  345 KMPYTDAVIHEIQRFSDLVPIGVPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPQYFDHPDSFNPEHFLDANGALK-----KSEAFMPFSTGKRICLGEGIARNELFLFFTTILQNF 457          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2A2_RAT (Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.048e-11
Identity = 37/123 (30.08%), Postives = 65/123 (52.85%), Query Frame = -1
Query:  177 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 545
            K+ Y  AV+ E  R     PL +PRR  ++ +  G+ +PK T +   + ++  +P+ + N  +F P+ FL+   + K      N  +LPF  G+R C G  LA+  L  +L ++L +F ++ P
Sbjct:  346 KMPYTQAVINEIQRFSNLAPLGIPRRIIKNTTFRGFFLPKGTDVFPIIGSLMTEPKFFPNHKDFNPQHFLDDKGQLK-----KNAAFLPFSIGKRFCLGDSLAKMELFLLLTTILQNFRFKFP 463          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
CP4E5_DROMT8.027e-1232.88Cytochrome P450 4e5, mitochondrial OS=Drosophila m... [more]
CP137_MYCTU8.027e-1233.33Putative cytochrome P450 137 OS=Mycobacterium tube... [more]
C525A_DICDI8.027e-1230.23Probable cytochrome P450 525A1 OS=Dictyostelium di... [more]
C4AC3_DROME8.027e-1229.58Probable cytochrome P450 4ac3 OS=Drosophila melano... [more]
CP6U1_DROME1.048e-1134.09Probable cytochrome P450 6u1 OS=Drosophila melanog... [more]
CP46A_MOUSE1.048e-1130.72Cholesterol 24-hydroxylase OS=Mus musculus GN=Cyp4... [more]
CP46A_HUMAN1.048e-1130.72Cholesterol 24-hydroxylase OS=Homo sapiens GN=CYP4... [more]
CP2E1_MACMU1.048e-1134.75Cytochrome P450 2E1 OS=Macaca mulatta GN=CYP2E1 PE... [more]
CP2B1_RAT1.048e-1131.36Cytochrome P450 2B1 OS=Rattus norvegicus GN=Cyp2b1... [more]
CP2A2_RAT1.048e-1130.08Cytochrome P450 2A2 OS=Rattus norvegicus GN=Cyp2a2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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