DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:41..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2BF_RAT (Cytochrome P450 2B15 OS=Rattus norvegicus GN=Cyp2b15 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 38/123 (30.89%), Postives = 63/123 (51.22%), Query Frame = -1
Query:  177 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 545
            K+ Y DAV+ E  R    +P+ +P R +      GY +PK+T +   + +   DP+ +D+P  F PE FL+V    K      +  +LPF +G+R+C G  +A+  L     ++L +F    P
Sbjct:  346 KMPYTDAVIHEIQRFADLIPIGLPHRVTNDTMFLGYLLPKNTEVYPILSSALHDPRYFDHPDTFNPEHFLDVNGTLK-----KSEAFLPFSTGKRICLGEGIAQNELFIFFTAILQNFSLASP 463          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP27A_RAT (Sterol 26-hydroxylase, mitochondrial OS=Rattus norvegicus GN=Cyp27a1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 46/151 (30.46%), Postives = 77/151 (50.99%), Query Frame = -1
Query:   87 LDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSG--NNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLVAIPTPRLS 533
            L AV+KE+ RL+P +P        +   I G+  PK+T  +L  + + RDP ++  P  F+P R+L    + + D SG  + F  +PFG G R C G  +AE  +  +L+ L+  +E  L  G    + E     +K    +V +P+ ++S
Sbjct:  388 LKAVIKETLRLYPVVPTNSRIITEKETEINGFLFPKNTQFVLCHYVVSRDPSVFPEPESFQPHRWLR---KREDDNSGIQHPFGSVPFGYGVRSCLGRRIAELEMQLLLSRLIQKYEVVLSPG----MGE-----VKSVSRIVLVPSKKVS 526          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP26A_HUMAN (Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 40/127 (31.50%), Postives = 65/127 (51.18%), Query Frame = -1
Query:  171 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 551
            L +LKY+  V+KE+ RL+P +P    R A ++  + GY IPK   ++ ++   H   +++ N  EF P+RF+    E       + F ++PFG G R C G   A+ +L      L    +W+L  G
Sbjct:  350 LEQLKYIGCVIKETLRLNPPVPGGF-RVALKTFELNGYQIPKGWNVIYSICDTHDVAEIFTNKEEFNPDRFMLPHPED-----ASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNG 470          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP191_CARAU (Cytochrome P450 19 type 1 OS=Carassius auratus GN=cyp19a1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.369e-11
Identity = 44/120 (36.67%), Postives = 62/120 (51.67%), Query Frame = -1
Query:  192 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 551
            L KL  L+  +KES R HP +  ++ RRA E   I GY + K T L+LN+  +H+  + +  P EF  E F N  V S++        + PFG G R C G  +A  M   +L +LL  F
Sbjct:  348 LQKLNVLERFIKESLRFHPVVDFIM-RRALEDDEIDGYRVAKGTNLILNIGRMHKS-EFFQKPNEFNLENFENT-VPSRY--------FQPFGCGPRACVGKHIAMVMTKAILVTLLSRF 456          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP4S3_DROME (Probable cytochrome P450 4s3 OS=Drosophila melanogaster GN=Cyp4s3 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 40/119 (33.61%), Postives = 65/119 (54.62%), Query Frame = -1
Query:  186 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEW 542
            + YL+AV+KE+ R++P++P    R+  E   +G  T+PK  ++   ++ +HRDP+ + +P  F P+RFL   V  K     + F +  F +G R C G   A   L   LA LL S+ +
Sbjct:  348 MPYLEAVIKETLRIYPSVPFF-SRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL---VNEK---QMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRF 459          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP4D8_DROME (Cytochrome P450 4d8 OS=Drosophila melanogaster GN=Cyp4d8 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 40/134 (29.85%), Postives = 75/134 (55.97%), Query Frame = -1
Query:  162 LPKLKYLDAVVKESFRLHPALPLLVPRRASE---SGSI-GGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 551
            L +LKY++ V+KES R++P +P++  +  ++   + S+ G   IP  + +++ ++ +HR P+ + NP EF PER  N    +        F+ +PF +G R C G   A+  +  +LA ++  +E  LP G ++
Sbjct:  314 LGELKYMECVIKESLRMYPPVPIVGRKLQTDFKYTHSVHGDGVIPAGSEIIIGIFGVHRQPETFPNPDEFIPERHENGSRVAP-------FKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYEL-LPMGQRV 439          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP26A_CHICK (Cytochrome P450 26A1 OS=Gallus gallus GN=CYP26A1 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 41/127 (32.28%), Postives = 64/127 (50.39%), Query Frame = -1
Query:  171 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 551
            L +LKY   V+KE+ RL P +P    R A ++  + GY IPK   ++ ++   H    L+ +  EF P+RF++   E       + F ++PFG G R C G   A+ +L      L  S +W+L  G
Sbjct:  345 LEQLKYTGCVIKETLRLSPPVPGGF-RIALKTLELNGYQIPKGWNVIYSICDTHDVADLFTDKDEFNPDRFMSPSPEDS-----SRFSFIPFGGGLRSCVGKEFAKVLLKIFTVELARSCDWQLLNG 465          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP135_DROME (Probable cytochrome P450 313a5 OS=Drosophila melanogaster GN=Cyp313a5 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = -1
Query:  192 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLE-FRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 551
            L KL  LD V+ E+ RL PA+PLL+ + +       G+ IP+  TLM++++  HR+  +W      F P+ FL     ++  YS     YLPF  G++ C G  L+       LA +L ++
Sbjct:  339 LEKLVKLDRVLHETMRLIPAVPLLIRQTSHSIQLSNGFYIPEGVTLMIDIFHTHRNKDIWGPQANAFNPDNFLPENKRARPPYS-----YLPFSKGKKTCLGWKLSLISAKLALAKILRNY 454          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CC44_CAEEL (Probable cytochrome P450 CYP44 OS=Caenorhabditis elegans GN=cyp-44A1 PE=2 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 44/120 (36.67%), Postives = 67/120 (55.83%), Query Frame = -1
Query:  189 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLW-DNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFE 545
            KL +L A +KE+FR+ P +   V R   ++  + GY +P  T + +N   + R   L+ D+P EF+P+R+L    E       + F YLPFG G RMCAG   AE+ L+  LA L  +++
Sbjct:  348 KLTFLRACIKETFRMFP-IGTEVSRVTQKNLILSGYEVPAGTAVDINTNVLMRHEVLFSDSPREFKPQRWLEKSKEV------HPFAYLPFGFGPRMCAGRRFAEQDLLTSLAKLCGNYD 460          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C508D_DICDI (Probable cytochrome P450 508D1 OS=Dictyostelium discoideum GN=cyp508d1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 37/130 (28.46%), Postives = 68/130 (52.31%), Query Frame = -1
Query:  159 PKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLN 548
            P   Y  A +KE+ RL    P  +P    +   + G+ IPKD+ +++N +++ R+P+ + +PL+F P RF+    +S          ++PFG+G R C G  L    +  +L+++  +F+     G KL+
Sbjct:  341 PSTPYTMACIKETIRLKAPAPFGLPHTTDQDIIVKGHFIPKDSMVLINFYSLGRNPKDFPDPLKFDPNRFIGSTPDS----------FMPFGTGPRNCIGQALGMDQIYLLLSNIFLNFKITSENGKKLD 460          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
CP2BF_RAT1.369e-1130.89Cytochrome P450 2B15 OS=Rattus norvegicus GN=Cyp2b... [more]
CP27A_RAT1.369e-1130.46Sterol 26-hydroxylase, mitochondrial OS=Rattus nor... [more]
CP26A_HUMAN1.369e-1131.50Cytochrome P450 26A1 OS=Homo sapiens GN=CYP26A1 PE... [more]
CP191_CARAU1.369e-1136.67Cytochrome P450 19 type 1 OS=Carassius auratus GN=... [more]
CP4S3_DROME1.788e-1133.61Probable cytochrome P450 4s3 OS=Drosophila melanog... [more]
CP4D8_DROME1.788e-1129.85Cytochrome P450 4d8 OS=Drosophila melanogaster GN=... [more]
CP26A_CHICK1.788e-1132.28Cytochrome P450 26A1 OS=Gallus gallus GN=CYP26A1 P... [more]
CP135_DROME1.788e-1133.06Probable cytochrome P450 313a5 OS=Drosophila melan... [more]
CC44_CAEEL1.788e-1136.67Probable cytochrome P450 CYP44 OS=Caenorhabditis e... [more]
C508D_DICDI1.788e-1128.46Probable cytochrome P450 508D1 OS=Dictyostelium di... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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