DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:41..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C5084_DICDI (Probable cytochrome P450 508A4 OS=Dictyostelium discoideum GN=cyp508a4 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.788e-11
Identity = 46/159 (28.93%), Postives = 76/159 (47.80%), Query Frame = -1
Query:   90 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGG-YTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGV-------ESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLVAIPTPRL 542
            L Y+ AV+KE+ R  P  P  VPR      +I   Y IPK   +++N  +I  + + + N  +F P RFL           ES F+   +N  ++PF  G R C G+  A+  L    A+++ +F  +   G K++ +  +G+ +K K     +   RL
Sbjct:  345 LPYVVAVIKETLRFKPVTPFGVPRSCVNEITIDEKYFIPKGAQVIINYPSIFENEKYFKNANQFDPSRFLQTTTTNTASNEESSFN---SNLAFIPFSIGPRNCVGMQFAQDELFLAFANIVLNFTIKSVDGKKIDETISYGVTLKPKTRFKVLLEKRL 500          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP6D3_MUSDO (Cytochrome P450 6d3 OS=Musca domestica GN=CYP6D3 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = -1
Query:  183 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGG--YTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWE 542
            +KYLD  VKE+ R +P LP L  R+ ++   +    +TI KDT +++++  +HRD + +  PL ++PERF +   E+K DY      Y+PFG G R C    +        LA +L +F  E
Sbjct:  371 MKYLDLCVKETTRKYPGLPFL-NRQCTQDFKVPNSKFTIKKDTNVIISLLGLHRDAKYFPEPLAYKPERFAD---ETK-DYDA--AAYMPFGEGPRHCIAQRMGVMNTKVALAKILANFNIE 485          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP6B2_HELAM (Cytochrome P450 6B2 OS=Helicoverpa armigera GN=CYP6B2 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 46/143 (32.17%), Postives = 69/143 (48.25%), Query Frame = -1
Query:  123 LKYLDAVVKESFRLHPALPLLVPRRASESGSIGG--YTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLS-EKFGIVIKKK 542
            +KYL+ V  E+ R++  +  L  R+A     + G    I KDT ++++   IH DP+ +DNP +F PERF    V  +   +     YLPFG G+R C G+       +  +  LL  F  E    T  NL  E +  +I  K
Sbjct:  354 MKYLNKVFDETLRMYSIVEPL-QRKAIRDYKLPGTDVVIEKDTVVLISPRGIHYDPKYYDNPKQFNPERFFAEEVGKRHPCA-----YLPFGLGQRNCIGMRFGRLQSLLCITKLLSKFRLEPSKNTDRNLQVEPYRFIIGPK 490          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP4X1_HUMAN (Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 38/120 (31.67%), Postives = 59/120 (49.17%), Query Frame = -1
Query:  192 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 551
            L ++ Y    +KE+ RL PA+P +    +       G T+P   T++L++W +H +P +W NP  F P RF     + +  Y+     YLPF +G R C G   A   L   +A +L  F
Sbjct:  361 LGEMSYTTMCIKETCRLIPAVPSISRDLSKPLTFPDGCTLPAGITVVLSIWGLHHNPAVWKNPKVFDPLRFSQENSDQRHPYA-----YLPFSAGSRNCIGQEFAMIELKVTIALILLHF 475          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2H1_CHICK (Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = -1
Query:  192 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 545
            +L Y DAV+ E  R    LPL VP    +   +  Y IPKDT +   +  I +D + + NP +F P  FLN  G   + DY      ++PF +G+R+CAG  LA   +   L S+L +F
Sbjct:  345 QLPYTDAVIHEIQRFIDFLPLNVPHAVIKDTKLRDYFIPKDTMIFPLLSPILQDCKEFPNPEKFDPGHFLNANGTFRRSDY------FMPFSAGKRICAGEGLARMEIFLFLTSILQNF 457          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP27A_RABIT (Sterol 26-hydroxylase, mitochondrial OS=Oryctolagus cuniculus GN=CYP27A1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 46/148 (31.08%), Postives = 73/148 (49.32%), Query Frame = -1
Query:   93 LDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWEL-PAGTKLNLSEKFGIVIKKKEPLVAIPTPR 533
            L AV+KE+ RL+P +P        +   +GG+  PK+T  +   +   RDP  +  P  F P R+L  G + +   + + F  +PFG G R C G  +AE  +  +LA L+  +E  L P   ++    +  +V  KK  L  +PT R
Sbjct:  389 LKAVLKETLRLYPVIPANSRIIVDKEIEVGGFLFPKNTQFVFCHYVTSRDPSTFSEPDTFWPYRWLRKG-QPETSKTQHPFGSVPFGYGVRACLGRRIAELEMQLLLARLIQRYELMLAPETGEVQSVARIVLVPNKKVGLRFLPTQR 535          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP26A_MOUSE (Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 40/127 (31.50%), Postives = 64/127 (50.39%), Query Frame = -1
Query:  171 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAG 551
            L +LKY+  V+KE+ RL+P +P    R A ++  + GY IPK   ++ ++   H    ++ N  EF P+RF+    E       + F ++PFG G R C G   A+ +L      L    +W+L  G
Sbjct:  350 LEQLKYIGCVIKETLRLNPPVPGGF-RVALKTFELNGYQIPKGWNVIYSICDTHDVADIFTNKEEFNPDRFIVPHPED-----ASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNG 470          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C5144_DICDI (Probable cytochrome P450 514A4 OS=Dictyostelium discoideum GN=cyp514a4 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.335e-11
Identity = 39/142 (27.46%), Postives = 69/142 (48.59%), Query Frame = -1
Query:  123 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLW-DNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKK 545
            K  Y+ +V+ ES+R + ++P+  P + +E   + GY I K T ++ N+   H   + W ++ LEF+PERF N  +  K            FG+G R C G    E      L  +L +F+   P    +++  + G+ ++ K
Sbjct:  359 KYPYIISVMNESYRYNSSVPITEPNKTTEDVEVNGYKIAKGTMIIKNLRGTHLSKEFWGEDALEFKPERFKNQPLNQK--------GLFHFGAGARACPGGRFTESFTFTFLVIMLKNFKIVNPTDIPIDVEGEVGLAMQCK 492          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2H2_CHICK (Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.050e-11
Identity = 43/119 (36.13%), Postives = 63/119 (52.94%), Query Frame = -1
Query:  192 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 545
            +L Y DAV+ E  R    LP+ +PR   +   +  Y IPKDT +   +  I +D + + NP +F P  FLN  G   K +Y      ++PF +G+R+CAG  LA   L   L S+L +F
Sbjct:  345 QLPYTDAVIHEIQRFIDFLPVNLPRAVIKDTKLRDYFIPKDTMIFPLLSPILQDCKEFPNPEKFDPGHFLNANGTFRKSNY------FMPFSAGKRICAGEGLARMELFLFLTSILQNF 457          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2E1_MESAU (Cytochrome P450 2E1 OS=Mesocricetus auratus GN=CYP2E1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 3.050e-11
Identity = 40/118 (33.90%), Postives = 63/118 (53.39%), Query Frame = -1
Query:  192 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 545
            ++ Y+DAVV E  R    +P  +P  A+      GY IPK T ++  + ++  D Q + +P +F+PE FLN     KF YS +   +  F +G+R+C G  LA   L  +L ++L  F
Sbjct:  346 EMPYMDAVVHEIQRFISLIPSNLPHEATRDTMFRGYVIPKGTVVIPTLDSLLYDSQEFPDPEKFKPEHFLN--ENGKFKYSDH---FKAFSAGKRVCVGEGLARMELFLLLTAILQHF 458          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
C5084_DICDI1.788e-1128.93Probable cytochrome P450 508A4 OS=Dictyostelium di... [more]
CP6D3_MUSDO2.335e-1135.25Cytochrome P450 6d3 OS=Musca domestica GN=CYP6D3 P... [more]
CP6B2_HELAM2.335e-1132.17Cytochrome P450 6B2 OS=Helicoverpa armigera GN=CYP... [more]
CP4X1_HUMAN2.335e-1131.67Cytochrome P450 4X1 OS=Homo sapiens GN=CYP4X1 PE=2... [more]
CP2H1_CHICK2.335e-1136.13Cytochrome P450 2H1 OS=Gallus gallus GN=CYP2H1 PE=... [more]
CP27A_RABIT2.335e-1131.08Sterol 26-hydroxylase, mitochondrial OS=Oryctolagu... [more]
CP26A_MOUSE2.335e-1131.50Cytochrome P450 26A1 OS=Mus musculus GN=Cyp26a1 PE... [more]
C5144_DICDI2.335e-1127.46Probable cytochrome P450 514A4 OS=Dictyostelium di... [more]
CP2H2_CHICK3.050e-1136.13Cytochrome P450 2H2 OS=Gallus gallus GN=CYP2H2 PE=... [more]
CP2E1_MESAU3.050e-1133.90Cytochrome P450 2E1 OS=Mesocricetus auratus GN=CYP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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