DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:41..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP308_DROME (Probable cytochrome P450 308a1 OS=Drosophila melanogaster GN=Cyp308a1 PE=2 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 45/124 (36.29%), Postives = 62/124 (50.00%), Query Frame = -1
Query:  201 LPKLKYLDAVVKESFRLHPALPLLVPRRAS-------ESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLL 551
            L +L+Y +A + E+ RLHPA+  L  R          +SG+     +   T L+L V AIH DP L+  P +FRPERFLN              ++L FG+G RMC G+ L        L +LL
Sbjct:  334 LGELRYSEAALLEALRLHPAMQALQKRCTKTFTLPDQKSGASSELKVHLGTVLVLPVQAIHLDPALYPAPNQFRPERFLN--------QPPMGCRFLGFGAGPRMCPGMRLGLLQTKAALTTLL 449          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2B9_MOUSE (Cytochrome P450 2B9 OS=Mus musculus GN=Cyp2b9 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 38/128 (29.69%), Postives = 64/128 (50.00%), Query Frame = -1
Query:  165 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTK 545
            K+ Y DAV+ E  R    +P+ +P +  +     GY +PK+T +   + +   DPQ ++ P +F PE+FL+  G   K +       +LPF +G+R+C G  +A   L     ++L +F    P   K
Sbjct:  345 KMPYTDAVIHEIQRFSDLVPIGLPHKVIKDTLFRGYLLPKNTEVYPVLSSALHDPQYFEQPDKFNPEQFLDANGALKKCE------AFLPFSTGKRICLGESIARNELFIFFTTILQNFSVASPVAPK 466          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2B6_HUMAN (Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 38/123 (30.89%), Postives = 58/123 (47.15%), Query Frame = -1
Query:  177 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELP 545
            K+ Y +AV+ E  R    LP+ VP   ++  S  GY IPKDT + L +     DP  ++ P  F P+ FL+     K         ++PF  G+R+C G  +A   L     ++L +F    P
Sbjct:  345 KMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALK-----KTEAFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASP 462          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP1A1_PAGMA (Cytochrome P450 1A1 OS=Pagrus major GN=cyp1a1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 43/138 (31.16%), Postives = 67/138 (48.55%), Query Frame = -1
Query:  123 DAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVW-AIHRDPQLWDNPLEFRPERFLNV-GVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKK 530
            +A + E FR    LP  +P   ++  S+ GY IPK   + +  W  IH D  + D P  F P+RFL   G E       N  + + FG G+R C G  +A   +   LA LL   ++    G  L+++ ++G+ +K K
Sbjct:  368 EAFILEIFRHSSFLPFTIPHCTTKDTSLNGYFIPKAPCIYIKQWPVIHDDDDVLD-PSSFNPDRFLKADGTEVN---KLNGEKMMVFGMGKRRCIGEVIARNEVYLFLAILLVQLQFHAMPGEPLDMTPEYGLTMKHK 501          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C515B_DICDI (Probable cytochrome P450 515B1 OS=Dictyostelium discoideum GN=cyp515b1 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 6.795e-11
Identity = 40/123 (32.52%), Postives = 63/123 (51.22%), Query Frame = -1
Query:  162 DAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 530
            +A VKE+ R  P +PL +P   SE   IGGY IPK T ++ N+++     +++ +PLEF P RF+            +  Q + F +G R+C G  L+E  L      L  +F++  P   +L
Sbjct:  357 NACVKETLRRSPPVPLGLPHLCSEDTEIGGYLIPKGTQIISNIYSASNCDKVFTDPLEFNPLRFI----------ENSPPQTVTFSTGPRVCPGKNLSEDELFSFGTKLFKTFKFSRPNKNQL 469          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP9E2_BLAGE (Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9E2 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = -1
Query:  162 LKYLDAVVKESFRLHPALPLLVPRRASESGSIG---GYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 542
            +KYLD VV ES RL+P   +   R+  ++  +     YT+     + + ++AIH DP+ + NP +F PERF +   E+K +     F YLPFGSG R C G   A       L  LL  F  ++ + T +
Sbjct:  383 MKYLDMVVSESLRLYPPA-IFTDRKCVKNYRLPMEPSYTLEPGDAVWIPIYAIHHDPKYYPNPEKFDPERFSD---ENKDNI--KPFTYLPFGSGPRNCIGNRFALMESKIALVHLLCRFNLKVVSKTPI 506          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP4B1_HUMAN (Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 36/124 (29.03%), Postives = 63/124 (50.81%), Query Frame = -1
Query:  180 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWEL 551
            L K+ YL   +KESFRL+P +P +  + +     + G ++P  + + ++++A+HR+  +W +P  F   RF       +     + F ++PF +G R C G   A   +  V A  L  FE+ L
Sbjct:  360 LGKMTYLTMCIKESFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISMHIYALHRNSAVWPDPEVFDSLRFSTENASKR-----HPFAFMPFSAGPRNCIGQQFAMSEMKVVTAMCLLRFEFSL 478          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP4A4_RABIT (Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CYP4A4 PE=1 SV=3)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 40/130 (30.77%), Postives = 65/130 (50.00%), Query Frame = -1
Query:  162 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKL 551
            L ++ Y    +KE+ RL+P +P +  + +       G ++PK   L L+++ +H +P++W NP  F P RF         D + ++  +LPF  G R C G   A R L   +A  L  FE  LP  T++
Sbjct:  366 LDQMPYTTMCIKEALRLYPPVPSVTRQLSKPVTFPDGRSLPKGVILFLSIYGLHYNPKVWQNPEVFDPFRFAP-------DSAYHSHAFLPFSGGARNCIGKQFAMRELKVAVALTLVRFEL-LPDPTRI 487          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP2B2_RAT (Cytochrome P450 2B2 OS=Rattus norvegicus GN=Cyp2b2 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 36/118 (30.51%), Postives = 60/118 (50.85%), Query Frame = -1
Query:  192 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSF 545
            K+ Y DAV+ E  R     P+ +P R ++     GY +PK+T +   + +   DPQ +D+P  F PE FL+     K      +  ++PF +G+R+C G  +A   L     ++L +F
Sbjct:  345 KMPYTDAVIHEIQRFADLAPIGLPHRVTKDTMFRGYLLPKNTEVYPILSSALHDPQYFDHPDTFNPEHFLDADGTLK-----KSEAFMPFSTGKRICLGEGIARNELFLFFTTILQNF 457          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP132_MYCTU (Putative cytochrome P450 132 OS=Mycobacterium tuberculosis GN=cyp132 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 41/132 (31.06%), Postives = 66/132 (50.00%), Query Frame = -1
Query:  156 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNL 551
            L KL +  A ++ES R   ++  ++ R A +   I G+ I + TT+++ +  IH DP+ W +P  F P RFL    +           YLPFG GRR+C G   A   ++ + A +   F ++L  G  + L
Sbjct:  318 LGKLAWTTACLQESQRYFSSV-WIIAREAVDDDIIDGHRIRRGTTVVIPIHHIHHDPRWWPDPDRFDPGRFLRCPTDRP------RCAYLPFGGGRRICIGQSFALMEMVLMAAIMSQHFTFDLAPGYHVEL 442          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
CP308_DROME6.795e-1136.29Probable cytochrome P450 308a1 OS=Drosophila melan... [more]
CP2B9_MOUSE6.795e-1129.69Cytochrome P450 2B9 OS=Mus musculus GN=Cyp2b9 PE=2... [more]
CP2B6_HUMAN6.795e-1130.89Cytochrome P450 2B6 OS=Homo sapiens GN=CYP2B6 PE=1... [more]
CP1A1_PAGMA6.795e-1131.16Cytochrome P450 1A1 OS=Pagrus major GN=cyp1a1 PE=2... [more]
C515B_DICDI6.795e-1132.52Probable cytochrome P450 515B1 OS=Dictyostelium di... [more]
CP9E2_BLAGE8.875e-1134.62Cytochrome P450 9e2 OS=Blattella germanica GN=CYP9... [more]
CP4B1_HUMAN8.875e-1129.03Cytochrome P450 4B1 OS=Homo sapiens GN=CYP4B1 PE=1... [more]
CP4A4_RABIT8.875e-1130.77Cytochrome P450 4A4 OS=Oryctolagus cuniculus GN=CY... [more]
CP2B2_RAT8.875e-1130.51Cytochrome P450 2B2 OS=Rattus norvegicus GN=Cyp2b2... [more]
CP132_MYCTU8.875e-1131.06Putative cytochrome P450 132 OS=Mycobacterium tube... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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