DN617284

Overview
NameDN617284
Unique NameDN617284
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length551
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10467 contig Csv1_Contig10467:41..591. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: CP132_MYCBO (Putative cytochrome P450 132 OS=Mycobacterium bovis GN=cyp132 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 41/132 (31.06%), Postives = 66/132 (50.00%), Query Frame = -1
Query:  156 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNL 551
            L KL +  A ++ES R   ++  ++ R A +   I G+ I + TT+++ +  IH DP+ W +P  F P RFL    +           YLPFG GRR+C G   A   ++ + A +   F ++L  G  + L
Sbjct:  318 LGKLAWTTACLQESQRYFSSV-WIIAREAVDDDIIDGHRIRRGTTVVIPIHHIHHDPRWWPDPDRFDPGRFLRCPTDRP------RCAYLPFGGGRRICIGQSFALMEMVLMAAIMSQHFTFDLAPGYHVEL 442          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C6A23_DROME (Probable cytochrome P450 6a23 OS=Drosophila melanogaster GN=Cyp6a23 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 41/156 (26.28%), Postives = 77/156 (49.36%), Query Frame = -1
Query:   87 LPKLKYLDAVVKESFRLHPALPLLVPRRASE-SGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLVAIPTPRLS 551
            + ++KYL+ VV E+ R +P L  L     ++ S     Y I K TT+++    IH DP+++  P +F+PERF +  + ++      +  +LPFG G R C G+          LA L+  +++ +   T++ +      ++   E  + +   +LS
Sbjct:  351 IKEMKYLEQVVMETLRKYPVLAHLTRMTQTDFSPEDPKYFIAKGTTVVIPALGIHYDPEIYPEPEKFKPERFTDEAIAAR-----PSCTWLPFGEGPRNCIGLRFGLMQACVGLAYLIRGYKFSVSTETQIPMKFVVKSILLSAENGIHLKVEKLS 501          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C4D10_DROMT (Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp4d10 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 42/147 (28.57%), Postives = 72/147 (48.98%), Query Frame = -1
Query:  111 LPKLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWELPAGTKLNLSEKFGIVIKKKEPLV 551
            L  L Y+D  +KE+ R++P++PLL  R+  +   I G  IP  T + ++   + R   +   P  F+PERF  V    K     N   Y+PF +G R C G   A   +  + A++L  +E E     + +      ++++ K+PL+
Sbjct:  364 LNNLNYMDLCIKETLRMYPSVPLL-GRKVLQECEINGKIIPAGTNIGISPLFLGRSEDISSEPNTFKPERFDVVTSAEKL----NPHAYIPFSAGPRNCIGQKFAMLEIKAIAANVLRHYEIEFVGNAEESPVLIAELILRTKDPLM 505          
BLAST of DN617284 vs. ExPASy Swiss-Prot
Match: C11B1_HUMAN (Cytochrome P450 11B1, mitochondrial OS=Homo sapiens GN=CYP11B1 PE=1 SV=5)

HSP 1 Score: 66.6254 bits (161), Expect = 8.875e-11
Identity = 40/121 (33.06%), Postives = 67/121 (55.37%), Query Frame = -1
Query:  183 KLKYLDAVVKESFRLHPALPLLVPRRASESGSIGGYTIPKDTTLMLNVWAIHRDPQLWDNPLEFRPERFLNVGVESKFDYSGNNFQYLPFGSGRRMCAGIPLAERMLMFVLASLLHSFEWE 545
            +L  L A +KE+ RL+P + L + R AS    +  Y IP  T + + ++++ R+P L+  P  + P+R+L++        SG NF ++PFG G R C G  LAE  ++ +L  +L   + E
Sbjct:  361 ELPLLRAALKETLRLYP-VGLFLERVASSDLVLQNYHIPAGTLVRVFLYSLGRNPALFPRPERYNPQRWLDIRG------SGRNFYHVPFGFGMRQCLGRRLAEAEMLLLLHHVLKHLQVE 474          
The following BLAST results are available for this feature:
BLAST of DN617284 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 434
Match NameE-valueIdentityDescription
CP132_MYCBO8.875e-1131.06Putative cytochrome P450 132 OS=Mycobacterium bovi... [more]
C6A23_DROME8.875e-1126.28Probable cytochrome P450 6a23 OS=Drosophila melano... [more]
C4D10_DROMT8.875e-1128.57Cytochrome P450 4d10 OS=Drosophila mettleri GN=Cyp... [more]
C11B1_HUMAN8.875e-1133.06Cytochrome P450 11B1, mitochondrial OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A02_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617284 ID=DN617284; Name=DN617284; organism=Citrus sinensis; type=EST; length=551bp
ATTAGAACTCTGAAATAACATACAAATCTCTCCGATACTCACAAAATCAT
CACAATCATTTTGTCTTAATGGTAGAGCTCTGAATTGGATAGTCTTGGTG
TTGGAATAGCAACCAAAGGCTCTTTTTTCTTAATGACAATCCCAAATTTT
TCAGATAAGTTTAGCTTTGTGCCAGCTGGCAATTCCCACTCAAATGAGTG
CAATAACGAAGCCAGAACAAACATCAGCATCCTCTCAGCTAGAGGAATCC
CAGCACACATCCTTCTACCAGAACCAAATGGCAAGTACTGAAAATTGTTA
CCTGAGTAATCGAACTTACTCTCGACACCAACATTCAGAAACCTCTCGGG
TCGAAATTCTAAGGGATTATCCCAAAGTTGAGGGTCCCTGTGGATAGCCC
AAACATTCAACATAAGAGTTGTATCTTTGGGAATGGTATAGCCACCAATG
CTGCCACTCTCACTTGCTCTGCGTGGTACTAATAAAGGCAATGCAGGATG
CAGACGAAACGATTCTTTCACCACAGCATCTAAATATTTCAATTTAGGCA
A
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