DN617283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_GIALA (Elongation factor 1-alpha (Fragment) OS=Giardia lamblia GN=TEF1 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 6.102e-46 Identity = 88/115 (76.52%), Postives = 98/115 (85.22%), Query Frame = 1 Query: 136 STTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 ST TGHLIYK GGID+R I+ +EK A EM K SFKYAWVLD+LK ERERGITI+IALWKFET KY T+IDAPGHRDFIKNMITGTSQAD A+L++ + G FEAGISKDGQTRE Sbjct: 1 STLTGHLIYKCGGIDQRTIDEYEKRATEMGKGSFKYAWVLDQLKDERERGITINIALWKFETKKYIVTIIDAPGHRDFIKNMITGTSQADVAILVVAAGQGEFEAGISKDGQTRE 115
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 7.970e-46 Identity = 79/132 (59.85%), Postives = 108/132 (81.82%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 +K H+NIV+IGHVD GKST TGH++Y+LG D++ ++ E+E+ +M K SFK+AW+LD++K ERERG+TI ++ KFET KY+ T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAG+S +GQTRE Sbjct: 5 QKPHLNIVIIGHVDHGKSTMTGHILYRLGYFDEKTVKMIEEESKKMGKESFKFAWLLDRMKEERERGVTISLSYMKFETKKYFFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSAEGQTRE 136
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_AERPE (Elongation factor 1-alpha OS=Aeropyrum pernix GN=tuf PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 1.776e-45 Identity = 82/132 (62.12%), Postives = 105/132 (79.55%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 EK H+N+VVIGHVD GKST GHL+Y+LG I+++ ++ E++A K SFK+AW+LDK+K ERERGITID+ KFET KY T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAG+S +GQTRE Sbjct: 3 EKPHMNLVVIGHVDHGKSTLVGHLLYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSTEGQTRE 134
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.503e-44 Identity = 81/135 (60.00%), Postives = 105/135 (77.78%), Query Frame = 1 Query: 76 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 M K H+N+VVIGHVD GKST GH++Y+LG +D++ I+ E+EA + K SFK+AW+LDKLK ERERG+TI + KFET +Y T+IDAPGHRDF+KNMITG SQAD A+L++ + G FEAG+S +GQTRE Sbjct: 1 MSSGKPHLNLVVIGHVDHGKSTLVGHILYRLGLVDQKTIQMLEEEAKKRGKESFKFAWLLDKLKEERERGVTIALTYMKFETRRYIFTIIDAPGHRDFVKNMITGASQADAALLVVSARKGEFEAGMSPEGQTRE 135
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: HBS1L_PONAB (HBS1-like protein OS=Pongo abelii GN=HBS1L PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 5.004e-40 Identity = 75/131 (57.25%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 K +N+VVIGHVD+GKST GH++Y LG I+KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTRE Sbjct: 258 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTRE 388
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: HBS1L_HUMAN (HBS1-like protein OS=Homo sapiens GN=HBS1L PE=1 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 5.004e-40 Identity = 75/131 (57.25%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 K +N+VVIGHVD+GKST GH++Y LG I+KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTRE Sbjct: 258 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNINKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTRE 388
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: HBS1L_RAT (HBS1-like protein OS=Rattus norvegicus GN=Hbs1l PE=2 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 6.535e-40 Identity = 74/131 (56.49%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 K +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTRE Sbjct: 253 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVVTLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTRE 383
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: HBS1L_MOUSE (HBS1-like protein OS=Mus musculus GN=Hbs1l PE=1 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 6.535e-40 Identity = 74/131 (56.49%), Postives = 100/131 (76.34%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 K +N+VVIGHVD+GKST GH++Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFETT T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTRE Sbjct: 256 KQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTRE 386
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 1.456e-39 Identity = 73/132 (55.30%), Postives = 103/132 (78.03%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 +K H+N++VIGHVD GKST G L+ G ID++ ++ E+ A ++ K S KYA+++D+LK ERERG+TI+++ +FET KY+ TVIDAPGHRDF+KNMITG SQAD A+L++ + G +EAG+S +GQTRE Sbjct: 3 QKPHLNLIVIGHVDHGKSTLIGRLLMDRGFIDEKTVKEAEEAAKKLGKDSEKYAFLMDRLKEERERGVTINLSFMRFETRKYFFTVIDAPGHRDFVKNMITGASQADAAILVVSAKKGEYEAGMSAEGQTRE 134
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: HBS1L_BOVIN (HBS1-like protein OS=Bos taurus GN=HBS1L PE=2 SV=1) HSP 1 Score: 160.999 bits (406), Expect = 2.483e-39 Identity = 74/131 (56.49%), Postives = 99/131 (75.57%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 K +N+VVIGHVD+GKST GHL+Y LG ++KR + ++E+E+ + K SF YAWVLD+ ERERG+T+D+ + KFET T++DAPGH+DFI NMITG +QAD AVL++D++ G FEAG GQTRE Sbjct: 260 KQLLNLVVIGHVDAGKSTLMGHLLYLLGDVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFETGGQTRE 390 The following BLAST results are available for this feature:
BLAST of DN617283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN617283 ID=DN617283; Name=DN617283; organism=Citrus sinensis; type=EST; length=482bpback to top |