DN617283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAE (Elongation factor 1-alpha OS=Pyrobaculum aerophilum GN=tuf PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 4.383e-36 Identity = 67/132 (50.76%), Postives = 92/132 (69.70%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 +K HIN+ V+GHVD+GKST G L+Y+ G +D++ ++ E+ A ++ K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FEA I GQ RE Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKALKEIEEMAKKIGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFEAAIGPQGQGRE 145
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 7.477e-36 Identity = 68/132 (51.52%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 +K H+N+ VIGHVD+GKST G L+Y+ G +D++ + E+ A +M K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDFIKNMI G SQAD A+ +I + G FE I GQ RE Sbjct: 14 QKPHLNLAVIGHVDNGKSTLVGRLLYETGYVDEKAFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFIKNMIVGASQADAALFVISARPGEFETAIGPQGQGRE 145
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_PYRCJ (Elongation factor 1-alpha OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=tuf PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.765e-36 Identity = 67/132 (50.76%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 +K HIN+ V+GHVD+GKST G L+Y+ G +D++ + E+ A +M K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FE I GQ RE Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKAFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETQKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGRE 145
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.765e-36 Identity = 67/118 (56.78%), Postives = 89/118 (75.42%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 +K H+N+ VIGHVD GKST G L+++ G + +IE+++ EA E K SF +AWV+D LK ERERG+TIDI+ +F+T KYY TV+D PGHRDF+KNMITG SQAD AVL++ + G Sbjct: 3 DKPHMNLAVIGHVDHGKSTFVGRLMFETGAVPAHLIEKYKAEAKEKGKESFAFAWVMDTLKEERERGVTIDISHKRFDTDKYYFTVVDCPGHRDFVKNMITGASQADAAVLVVAAPDG 120
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_META3 (Elongation factor 1-alpha OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=tuf PE=3 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 9.765e-36 Identity = 76/135 (56.30%), Postives = 95/135 (70.37%), Query Frame = 1 Query: 76 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 M KEK +N+ IGHVD+GKSTT G L+ G ID ++IER ++EA+E K F++A+V+D LK ERERG+TIDIA KFE+ KY T++D PGHRDFIKNMITG SQAD AVL+ D +A QTRE Sbjct: 1 MAKEKPVLNVAFIGHVDAGKSTTVGRLLLDSGTIDPQIIERLKREASEKGKAGFEFAYVMDGLKEERERGVTIDIAHKKFESKKYDVTIVDCPGHRDFIKNMITGASQADAAVLVCDVN----DAKTGLQPQTRE 131
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_PYRAR (Elongation factor 1-alpha OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=tuf PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.666e-35 Identity = 67/132 (50.76%), Postives = 90/132 (68.18%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 +K HIN+ V+GHVD+GKST G L+Y+ G +D++ + E+ A +M K F +AW+LD+ K ERERG+TI+ FET K + T+ID PGHRDF+KNMI G SQAD A+ +I + G FE I GQ RE Sbjct: 14 QKPHINLAVVGHVDNGKSTLVGRLLYETGYVDEKGFKEIEEMAKKMGKEDFAFAWILDRFKEERERGVTIEATHVGFETNKLFITIIDLPGHRDFVKNMIVGASQADAALFVISARPGEFETAIGPQGQGRE 145
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: ERF3A_MOUSE (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Mus musculus GN=Gspt1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.405e-34 Identity = 65/132 (49.24%), Postives = 93/132 (70.45%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 +K H+N+V IGHVD+GKST G ++Y G +DKR +E++E+EA E N+ ++ +W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G SQAD AVL+I + G FE G K GQTRE Sbjct: 71 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTRE 202
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: ERF3A_HUMAN (Eukaryotic peptide chain release factor GTP-binding subunit ERF3A OS=Homo sapiens GN=GSPT1 PE=1 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.405e-34 Identity = 65/132 (49.24%), Postives = 93/132 (70.45%), Query Frame = 1 Query: 85 EKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480 +K H+N+V IGHVD+GKST G ++Y G +DKR +E++E+EA E N+ ++ +W LD + ER++G T+++ FET K + T++DAPGH+ F+ NMI G SQAD AVL+I + G FE G K GQTRE Sbjct: 71 KKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTRE 202
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_METMP (Elongation factor 1-alpha OS=Methanococcus maripaludis GN=tuf PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.405e-34 Identity = 75/137 (54.74%), Postives = 92/137 (67.15%), Query Frame = 1 Query: 76 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTRE 480 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R KEA E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD AVL+ +D G + QTRE Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLRKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAVLVVNVDDAKSGIQP------QTRE 131
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EF1A_METM5 (Elongation factor 1-alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=tuf PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.405e-34 Identity = 74/137 (54.01%), Postives = 93/137 (67.88%), Query Frame = 1 Query: 76 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLI--IDSTTGGFEAGISKDGQTRE 480 M KEK +N+ IGHVD+GKSTT G L+ G ID ++I R +KEA E K F++A+V+D LK ERERG+TID+A KF T KY T++D PGHRDFIKNMITG SQAD A+L+ +D G + QTRE Sbjct: 1 MAKEKPILNVAFIGHVDAGKSTTVGRLLLDGGAIDPQLIVRLKKEAEEKGKAGFEFAYVMDGLKEERERGVTIDVAHKKFPTAKYEVTIVDCPGHRDFIKNMITGASQADAAILVVNVDDAKSGIQP------QTRE 131 The following BLAST results are available for this feature:
BLAST of DN617283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617283 ID=DN617283; Name=DN617283; organism=Citrus sinensis; type=EST; length=482bpback to top |