DN617283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU1_STRCU (Elongation factor Tu-1 OS=Streptomyces collinus GN=tuf1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.501e-15 Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFE--KEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+NI IGH+D GK+T T I K + + F EA+ ++ +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDAFPDLNEASAFDQ--------IDKAPEERQRGITISIAHVEYQTETRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG 113
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESR (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-7) GN=tuf1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.501e-15 Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+N+ IGHVD GK+T T + + L + + EA + ++ +D ERERGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ ST G Sbjct: 8 RNKPHVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU1_SHESM (Elongation factor Tu 1 OS=Shewanella sp. (strain MR-4) GN=tuf1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.501e-15 Identity = 43/119 (36.13%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+N+ IGHVD GK+T T + + L + + EA + ++ +D ERERGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ ST G Sbjct: 8 RNKPHVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU1_CARHZ (Elongation factor Tu 1 OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=tuf1 PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.501e-15 Identity = 44/117 (37.61%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 K H+NI IGHVD GK+T T + L +R+++ +D ERERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G Sbjct: 10 KPHVNIGTIGHVDHGKTTLTAAITTVLAKRGLAQQKRYDE---------------IDNAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_TOBAC (Elongation factor Tu, chloroplastic OS=Nicotiana tabacum GN=TUFA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.266e-15 Identity = 42/119 (35.29%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 ++K H+NI IGHVD GK+T T L L + +++++ +D ER RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+ G Sbjct: 77 RKKPHVNIGTIGHVDHGKTTLTAALTMALASMGNSAPKKYDE---------------IDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSGADG 180
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_SYNS9 (Elongation factor Tu OS=Synechococcus sp. (strain CC9902) GN=tuf PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.266e-15 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+NI IGHVD GK+T T + L + ++ + +D ERERGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L+ +T G Sbjct: 8 RNKPHVNIGTIGHVDHGKTTLTAAITNVLAKKGQAQVQNYAD---------------IDGAPEERERGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_SHEPU (Elongation factor Tu OS=Shewanella putrefaciens GN=tuf PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.266e-15 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 K H+N+ IGHVD GK+T T + + L + + EA + ++ +D ERERGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ ST G Sbjct: 10 KPHVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_SHEPC (Elongation factor Tu OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=tuf1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.266e-15 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 K H+N+ IGHVD GK+T T + + L + + EA + ++ +D ERERGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ ST G Sbjct: 10 KPHVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_SHEB8 (Elongation factor Tu OS=Shewanella baltica (strain OS185) GN=tuf1 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.266e-15 Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 K H+N+ IGHVD GK+T T + + L + + EA + ++ +D ERERGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ ST G Sbjct: 10 KPHVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_PSEAK (Elongation factor Tu, chloroplastic OS=Pseudendoclonium akinetum GN=tufA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.266e-15 Identity = 42/119 (35.29%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 ++K H+NI IGHVD GK+T T + L K +R+++ +D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ G Sbjct: 8 RKKQHVNIGTIGHVDHGKTTLTAAITMCLQSFSKNKGKRYDE---------------IDSAPEEKARGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 111 The following BLAST results are available for this feature:
BLAST of DN617283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617283 ID=DN617283; Name=DN617283; organism=Citrus sinensis; type=EST; length=482bpback to top |