DN617283

Overview
NameDN617283
Unique NameDN617283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_AERHH (Elongation factor Tu OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+N+  IGHVD GK+T T  +   L              A     ++F +  + DK   ERERGITI+ +  +++T   +   +D PGH D++KNMITG +Q D A+L++ +T G
Sbjct:    8 RNKPHVNVGTIGHVDHGKTTLTAAITNVL--------------AKHFGGKAFAFDQI-DKAPEERERGITINTSHVEYDTATRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU2_DESPS (Elongation factor Tu 2 OS=Desulfotalea psychrophila GN=tuf2 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480
            + K H+N+  IGH+D GK+T T  +   L               +   + SF     +DK   E+ERGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QTRE
Sbjct:    8 RTKPHVNVGTIGHIDHGKTTLTAAITRVL---------------STKGQASFTDFSDIDKAPEEKERGITIATAHVEYETVNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGAMP-------QTRE 118          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU1_STRCO (Elongation factor Tu-1 OS=Streptomyces coelicolor GN=tuf1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGH+D GK+T T  +   L      +      EA+  ++        +DK   ER+RGITI IA  +++T   +   +D PGH D+IKNMITG +Q D A+L++ +T G
Sbjct:    8 RTKPHVNIGTIGHIDHGKTTLTAAITKVLHDAYPDI-----NEASAFDQ--------IDKAPEERQRGITISIAHVEYQTEARHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG 113          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU1_SHEB9 (Elongation factor Tu 1 OS=Shewanella baltica (strain OS195) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 43/117 (36.75%), Postives = 67/117 (57.26%), Query Frame = 1
Query:   88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            K H+N+  IGHVD GK+T T  + + L        + +  EA + ++        +D    ERERGITI+ +  +++T   +   +D PGH D++KNMITG +Q D A+L++ ST G
Sbjct:   10 KPHVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDG 111          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU1_DESPS (Elongation factor Tu 1 OS=Desulfotalea psychrophila GN=tuf1 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 48/133 (36.09%), Postives = 68/133 (51.13%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTRE 480
            + K H+N+  IGH+D GK+T T  +   L               +   + SF     +DK   E+ERGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QTRE
Sbjct:    8 RTKPHVNVGTIGHIDHGKTTLTAAITRVL---------------STKGQASFTDFSDIDKAPEEKERGITIATAHVEYETVNRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGAMP-------QTRE 118          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: CYSN_PSYIN (Sulfate adenylyltransferase subunit 1 OS=Psychromonas ingrahamii (strain 37) GN=cysN PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 42/121 (34.71%), Postives = 68/121 (56.20%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNK--RSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K  +  +  G VD GKST  G L++    I +  +   EK++ + N     F  + ++D L++ERE+GITID+A   F T +    + D PGH  + +NM+TG S  D A+++ID+  G
Sbjct:   20 ENKDLMRFITCGSVDDGKSTLIGRLLFDSKMIFEDHMAAIEKDSKKFNTTDNDFDLSLLVDGLQSEREQGITIDVAYRYFATEQRKFIIADTPGHEQYTRNMVTGASTCDLAIILIDARYG 140          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: CYSN_CHRVO (Sulfate adenylyltransferase subunit 1 OS=Chromobacterium violaceum GN=cysN PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 47/128 (36.72%), Postives = 71/128 (55.47%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY---------AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K  +  +  G VD GKST  G L++     D ++I  FE + A + + S KY         A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S ++ A+++ID+  G
Sbjct:   20 ENKDMLRFITCGSVDDGKSTLIGRLLH-----DSKLI--FEDQLAAIERDSKKYNTTDQDIDLALLVDGLQAEREQGITIDVAYRYFSTDKRKFIIADCPGHEQYTRNMATGASTSNLAIILIDARRG 140          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: CYSN_ARCB4 (Sulfate adenylyltransferase subunit 1 OS=Arcobacter butzleri (strain RM4018) GN=cysN PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 43/121 (35.54%), Postives = 69/121 (57.02%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMN--KRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K  +  +  G VD GKST  G L++    I +  +   +K++ ++   +  F  A ++D L++ERE+GITID+A   F T K    + D PGH  + +NM TG S AD A+++ID+  G
Sbjct:   20 ENKQLLRFITCGSVDDGKSTLIGRLLHDSKMIFEDQLAAIKKDSKKVGTTEGEFDLALLVDGLQSEREQGITIDVAYRYFTTDKRKFIIADTPGHEQYTRNMATGASTADLAIILIDARYG 140          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: CYSN_AERS4 (Sulfate adenylyltransferase subunit 1 OS=Aeromonas salmonicida (strain A449) GN=cysN PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K+ +  +  G VD GKST  G L++    I +  ++  E ++ ++     K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLHDSQQIYEDQLKALESDSQKLGTTGEKLDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIISDTPGHEQYTRNMATGASTCDLAIILIDARKG 142          
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: CYSN_AERHH (Sulfate adenylyltransferase subunit 1 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=cysN PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.265e-15
Identity = 43/121 (35.54%), Postives = 68/121 (56.20%), Query Frame = 1
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKY--AWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K+ +  +  G VD GKST  G L++    I +  ++  E ++ ++     K   A ++D L+AERE+GITID+A   F T K    + D PGH  + +NM TG S  D A+++ID+  G
Sbjct:   22 QHKSLLRFLTCGSVDDGKSTLIGRLLHDSQQIYEDQLKALESDSQKLGTTGEKLDLALLVDGLQAEREQGITIDVAYRYFSTAKRKFIISDTPGHEQYTRNMATGASTCDLAIILIDARKG 142          
The following BLAST results are available for this feature:
BLAST of DN617283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_AERHH4.265e-1536.13Elongation factor Tu OS=Aeromonas hydrophila subsp... [more]
EFTU2_DESPS4.265e-1536.09Elongation factor Tu 2 OS=Desulfotalea psychrophil... [more]
EFTU1_STRCO4.265e-1537.82Elongation factor Tu-1 OS=Streptomyces coelicolor ... [more]
EFTU1_SHEB94.265e-1536.75Elongation factor Tu 1 OS=Shewanella baltica (stra... [more]
EFTU1_DESPS4.265e-1536.09Elongation factor Tu 1 OS=Desulfotalea psychrophil... [more]
CYSN_PSYIN4.265e-1534.71Sulfate adenylyltransferase subunit 1 OS=Psychromo... [more]
CYSN_CHRVO4.265e-1536.72Sulfate adenylyltransferase subunit 1 OS=Chromobac... [more]
CYSN_ARCB44.265e-1535.54Sulfate adenylyltransferase subunit 1 OS=Arcobacte... [more]
CYSN_AERS44.265e-1535.54Sulfate adenylyltransferase subunit 1 OS=Aeromonas... [more]
CYSN_AERHH4.265e-1535.54Sulfate adenylyltransferase subunit 1 OS=Aeromonas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617283 ID=DN617283; Name=DN617283; organism=Citrus sinensis; type=EST; length=482bp
CAATTTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGAATATCATTTTA
ATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGGAGAAGACTCACATCA
ACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGA
CACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTT
CGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGG
TGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATT
GCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGC
TCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGG
CTGACTGTGCTGTCCTCATCATTGACTCTACCACTGGTGGTTTTGAAGCT
GGTATCTCCAAGGATGGTCAGACTCGTGAGCA
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