DN617283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_SPHWW (Elongation factor Tu OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 45/119 (37.82%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H NI IGHVD GK++ T + K AE +F +DK ERERGITI A ++ET + + +D PGH D++KNMITG +Q D +L++ +T G Sbjct: 8 RTKPHCNIGTIGHVDHGKTSLTAAIT---------------KVLAETGGATFVDYANIDKAPEERERGITISTAHVEYETEQRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSATDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_SCHPO (Elongation factor Tu, mitochondrial OS=Schizosaccharomyces pombe GN=tuf1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 ++K H+NI IGHVD GK+T T + K +++ + SF +DK E+ RGITI A ++ET + +D PGH D+IKNMITG + D A++++ +T G Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTAAIT---------------KCLSDLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIVVSATDG 152
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_PROWI (Elongation factor Tu, plastid OS=Prototheca wickerhamii GN=tufA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 ++K H+NI IGHVD GK+T T + L AA + KYA + D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ G Sbjct: 8 RKKPHVNIGTIGHVDHGKTTLTAAITMAL--------------AARGGGKGKKYAEI-DSAPEEKARGITINTAHVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_NOCSJ (Elongation factor Tu OS=Nocardioides sp. (strain BAA-499 / JS614) GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 45/119 (37.82%), Postives = 67/119 (56.30%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+NI IGH+D GK+T T I K + +++ + F +DK ER+RGITI IA +++T + +D PGH D+IKNMITG +Q D A+L++ +T G Sbjct: 8 RTKPHVNIGTIGHIDHGKTTLTA-------AITKVLHDKYP------DLNPFTPFDEIDKAPEERQRGITISIAHVEYQTESRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDG 113
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_HERAU (Elongation factor Tu OS=Herpetosiphon aurantiacus GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 45/119 (37.82%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K HINI IGHVD GK+T T + K A + F+ +D ER RGITI I+ ++ET + +D PGH D+IKNMITG +Q D A+L++ + G Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAIT---------------KTMALRGRAEFRAFDQIDNAPEERARGITISISHVEYETENRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAPDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_HELSJ (Elongation factor Tu, plastid OS=Helicosporidium sp. subsp. Simulium jonesii GN=tufA PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 46/117 (39.32%), Postives = 61/117 (52.14%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 K HINI IGHVD GK+T T + L I N + YA + D E+ RGITI+ ++ET K + +D PGH D+IKNMITG +Q D A+L++ G Sbjct: 10 KPHINIGTIGHVDHGKTTLTAAITMALASIG--------------NTKGKNYADI-DSAPEEKARGITINTTHVEYETAKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSGADG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_GRATL (Elongation factor Tu, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=tufA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 41/119 (34.45%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 ++K H+NI IGHVD GK+T T + L + ++F++ +D E+ RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L++ + G Sbjct: 8 RKKPHVNIGTIGHVDHGKTTLTAAISATLAAANDTKAKKFDE---------------IDAAPEEKARGITINTAHVEYETQNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_GEOKA (Elongation factor Tu OS=Geobacillus kaustophilus GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 45/119 (37.82%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+NI IGHVD GK+T T + L A+ K K +D ERERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITTVL---------------AKQGKAEAKAYDQIDAAPEERERGITISTAHVEYETDARHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_CYAPA (Elongation factor Tu, cyanelle OS=Cyanophora paradoxa GN=tufA PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 1 Query: 88 KTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 K H+NI IGHVD GK+T T + L K ++++ +D E+ RGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ + G Sbjct: 10 KPHVNIGTIGHVDHGKTTLTAAITTALASQGKGKARKYDE---------------IDAAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBM (Elongation factor Tu OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=tuf1 PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 5.571e-15 Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+NI IGHVD GK+T T + L +K A K +DK E+ERGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ + G Sbjct: 8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111 The following BLAST results are available for this feature:
BLAST of DN617283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617283 ID=DN617283; Name=DN617283; organism=Citrus sinensis; type=EST; length=482bpback to top |