DN617283
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_SHEAM (Elongation factor Tu OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=tuf1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 42/119 (35.29%), Postives = 68/119 (57.14%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+N+ IGHVD GK+T T + + L + + EA + ++ +D ERERGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ +T G Sbjct: 8 RTKPHVNVGTIGHVDHGKTTLTAAISHVLA-------KTYGGEAKDFSQ--------IDNAPEERERGITINTSHIEYDTPTRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_OCEIH (Elongation factor Tu OS=Oceanobacillus iheyensis GN=tuf PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 43/122 (35.25%), Postives = 66/122 (54.10%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K+H+N+ +GHVD GK+T T + + K GG + R ++ +D ERERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G Sbjct: 8 RSKSHVNVGTLGHVDHGKTTLTAAITTVLAKHGGGEARAYDQ------------------IDGAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_MYCPN (Elongation factor Tu OS=Mycoplasma pneumoniae GN=tuf PE=3 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST 432 + K H+N+ IGH+D GK+T T + L K R+++ +DK E+ RGITI+ A ++ + K + +D PGH D+IKNMITG +Q D A+L++ +T Sbjct: 8 RSKPHVNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDQ---------------IDKAPEEKARGITINSAHVEYSSDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAT 109
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_MYCGE (Elongation factor Tu OS=Mycoplasma genitalium GN=tuf PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 41/117 (35.04%), Postives = 64/117 (54.70%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDST 432 + K H+N+ IGH+D GK+T T + L K R+++ +DK E+ RGITI+ A ++ + K + +D PGH D+IKNMITG +Q D A+L++ +T Sbjct: 8 RSKPHVNVGTIGHIDHGKTTLTAAICTVLAKEGKSAATRYDE---------------IDKAPEEKARGITINSAHVEYSSDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAT 109
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_LEPTE (Elongation factor Tu, chloroplastic OS=Leptosira terrestris GN=tufA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 44/119 (36.97%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 ++K H+NI IGHVD GK+T T + + AA + KY + D E++RGITI+ A ++ET K + +D PGH D++KNMITG +Q D A+L++ G Sbjct: 8 RKKPHVNIGTIGHVDHGKTTLTAAITMAM--------------AARGGGKGKKYDDI-DSAPEEKQRGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_GEOTN (Elongation factor Tu OS=Geobacillus thermodenitrificans (strain NG80-2) GN=tuf PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+NI IGHVD GK+T T + L K +++ +D ERERGITI A ++ET + +D PGH D++KNMITG +Q D A+L++ + G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITTVLAKQGKAEARAYDQ---------------IDAAPEERERGITISTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_DESVM (Elongation factor Tu OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=tuf PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 49/126 (38.89%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 76 MGKEK-----THINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 MGKEK H+NI IGH+D GK+T T I K+ G+ F +DK E+ERGITI A ++ET + +D PGH D+IKNMITG +Q D +L++ +T G Sbjct: 1 MGKEKFERKKPHVNIGTIGHIDHGKTTLTA-AITKVAGL--------------RGNGKFVAFDEIDKAPEEKERGITIATAHVEYETATRHYAHVDCPGHADYIKNMITGAAQMDGGILVVAATDG 111
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_DEIRA (Elongation factor Tu OS=Deinococcus radiodurans GN=tufA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 43/119 (36.13%), Postives = 65/119 (54.62%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K H+NI IGHVD GK+T T + + D + E A + +DK E+ RGITI+ A +++T + + +D PGH D++KNMITG +Q D A+L++ S G Sbjct: 8 RTKPHVNIGTIGHVDHGKTTLTAAITFTAASADPTI----ETLAYDQ----------IDKAPEEKARGITINTAHVEYQTETRHYSHVDCPGHADYVKNMITGAAQMDGAILVVSSADG 112
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_CYACA (Elongation factor Tu, chloroplastic OS=Cyanidium caldarium GN=tufA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 43/120 (35.83%), Postives = 67/120 (55.83%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRV-IERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K HINI IGHVD GK+T T + L ID V +++F++ +D E+ RGITI+ + +++T + +D PGH D++KNMITG +Q D A+L++ + G Sbjct: 8 RSKPHINIGTIGHVDHGKTTLTAAISAVLASIDNTVKLKKFDE---------------IDAAPEEKARGITINTSHVEYQTPLRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 112
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_CHLPN (Elongation factor Tu OS=Chlamydia pneumoniae GN=tuf PE=3 SV=3) HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15 Identity = 44/119 (36.97%), Postives = 63/119 (52.94%), Query Frame = 1 Query: 82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438 + K HINI IGHVD GK+T T + L G SF+ +D E+ RGITI+ + ++ET + +D PGH D++KNMITG +Q D A+L++ +T G Sbjct: 8 RNKPHINIGTIGHVDHGKTTLTAAITRALSGD---------------GLASFRDYSSIDNTPEEKARGITINASHVEYETPNRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDG 111 The following BLAST results are available for this feature:
BLAST of DN617283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617283 ID=DN617283; Name=DN617283; organism=Citrus sinensis; type=EST; length=482bpback to top |