DN617283

Overview
NameDN617283
Unique NameDN617283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BREBN (Elongation factor Tu OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 45/119 (37.82%), Postives = 64/119 (53.78%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   L             +A  MN  S      +D    E+ERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G
Sbjct:    8 RNKPHVNIGTIGHVDHGKTTLTAAITTVLAQTG---------QAQAMNYAS------IDAAPEEKERGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADG 111
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACWK (Elongation factor Tu OS=Bacillus weihenstephanensis (strain KBAB4) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACHK (Elongation factor Tu OS=Bacillus thuringiensis subsp. konkukian GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACCZ (Elongation factor Tu OS=Bacillus cereus (strain ZK / E33L) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACCR (Elongation factor Tu OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACCQ (Elongation factor Tu OS=Bacillus cereus (strain Q1) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACCN (Elongation factor Tu OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACC7 (Elongation factor Tu OS=Bacillus cereus (strain AH187) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACC4 (Elongation factor Tu OS=Bacillus cereus (strain B4264) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111
[Close]
BLAST of DN617283 vs. ExPASy Swiss-Prot
Match: EFTU_BACC3 (Elongation factor Tu OS=Bacillus cereus (strain 03BB102) GN=tuf PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.276e-15
Identity = 44/122 (36.07%), Postives = 64/122 (52.46%), Query Frame = 1 
Query:   82 KEKTHINIVVIGHVDSGKSTTTGHL---IYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTG 438
            + K H+NI  IGHVD GK+T T  +   + K GG + R  ++                  +D    ERERGITI  A  ++ET   +   +D PGH D++KNMITG +Q D  +L++ +  G
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLAKAGGAEARGYDQ------------------IDAAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSAADG 111
The following BLAST results are available for this feature:
BLAST of DN617283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_BREBN7.276e-1537.82Elongation factor Tu OS=Brevibacillus brevis (stra... [more]
EFTU_BACWK7.276e-1536.07Elongation factor Tu OS=Bacillus weihenstephanensi... [more]
EFTU_BACHK7.276e-1536.07Elongation factor Tu OS=Bacillus thuringiensis sub... [more]
EFTU_BACCZ7.276e-1536.07Elongation factor Tu OS=Bacillus cereus (strain ZK... [more]
EFTU_BACCR7.276e-1536.07Elongation factor Tu OS=Bacillus cereus (strain AT... [more]
EFTU_BACCQ7.276e-1536.07Elongation factor Tu OS=Bacillus cereus (strain Q1... [more]
EFTU_BACCN7.276e-1536.07Elongation factor Tu OS=Bacillus cereus subsp. cyt... [more]
EFTU_BACC77.276e-1536.07Elongation factor Tu OS=Bacillus cereus (strain AH... [more]
EFTU_BACC47.276e-1536.07Elongation factor Tu OS=Bacillus cereus (strain B4... [more]
EFTU_BACC37.276e-1536.07Elongation factor Tu OS=Bacillus cereus (strain 03... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS11_01A01_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0001A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN617283 ID=DN617283; Name=DN617283; organism=Citrus sinensis; type=EST; length=482bp
CAATTTCCGAAGGGCGGCGAGAGAGAACCATTTTCGCGAATATCATTTTA
ATAAGGTTTTTTCTAGATTTGCCTAATGGGTAAGGAGAAGACTCACATCA
ACATTGTGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGA
CACTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTT
CGAGAAGGAAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGG
TGCTCGACAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATT
GCCTTGTGGAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGC
TCCCGGACATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGG
CTGACTGTGCTGTCCTCATCATTGACTCTACCACTGGTGGTTTTGAAGCT
GGTATCTCCAAGGATGGTCAGACTCGTGAGCA
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