DN617282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_THECE (Elongation factor 1-alpha OS=Thermococcus celer GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21 Identity = 43/90 (47.78%), Postives = 66/90 (73.33%), Query Frame = -3 Query: 276 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 545 GY PVL HT +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTKPMV+E + P +GRFA+RDM QTVA G++ +++K + Sbjct: 339 GYTPVLHAHTLQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVVLRPTKPMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_SULAC (Elongation factor 1-alpha OS=Sulfolobus acidocaldarius GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21 Identity = 47/92 (51.09%), Postives = 67/92 (72.83%), Query Frame = -3 Query: 279 IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 554 +G GY PVL HT+ IA + SE+ ++ID ++GKE EK P+F+K GD+ +VK P K +V E F ++P LGRFA+RDM +TV VGVI +V+ + Sbjct: 339 VGVGYTPVLHVHTASIACRVSEITSRIDPKTGKEAEKNPQFIKAGDSAIVKFKPIKELVAEKFREFPALGRFAMRDMGKTVGVGVIIDVKPR 430
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_STAMF (Elongation factor 1-alpha OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21 Identity = 43/87 (49.43%), Postives = 66/87 (75.86%), Query Frame = -3 Query: 285 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 545 GY PV+ HT+ +A + E+ K+D R+GK +E+ P+F+K GDA +V+ P KP+VVE +SD+PPLGRFA+RDM +T+ +GV+ +V+ Sbjct: 343 GYTPVIHIHTASVASRIVEIKAKLDPRTGKVVEENPQFIKMGDAAIVRFKPIKPLVVEKYSDFPPLGRFAMRDMGKTIGIGVVVDVK 429
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_PYRIL (Elongation factor 1-alpha OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=tuf PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.750e-21 Identity = 46/90 (51.11%), Postives = 68/90 (75.56%), Query Frame = -3 Query: 285 IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 554 IG GYAPV+ HT+ + V+ ELV+K+D R+G+ +E++P+F+K GD +VK+ P KP+V E FS++P LGRFA+RDM +T+A G I V+ Sbjct: 348 IGPGYAPVMHIHTATVPVQIVELVSKLDPRTGQAVEQKPQFIKQGDVAIVKIKPLKPVVAEKFSEFPALGRFALRDMGRTIAAGQIIEVK 437
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METMJ (Elongation factor 1-alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = -3 Query: 279 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 545 GY PV CHT+ IA F EL+ K+D R+G+ E+ P FLK GDA +VK+ PT+PMV+E + P LGRFAVRDM T+A GV ++ K Sbjct: 334 GYTPVFHCHTAQIACSFVELMKKLDPRTGQVKEENPTFLKTGDAAIVKIRPTQPMVIEKVKEIPQLGRFAVRDMGSTIAAGVCMDITPK 422
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_DESMO (Elongation factor 1-alpha OS=Desulfurococcus mobilis GN=tuf PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 6.204e-21 Identity = 44/90 (48.89%), Postives = 64/90 (71.11%), Query Frame = -3 Query: 285 IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 554 I GY PV+ HT+ +A + +E++ KID R+GKE+EK P FLK GD +VK P KP+VVE +SD+ LGRFA+RDM +T+ +G + ++ Sbjct: 341 IAVGYTPVIHVHTASVACRITEIIAKIDPRTGKEIEKNPHFLKQGDIAIVKFKPIKPLVVEKYSDFQGLGRFAMRDMGKTIGIGQVLEIK 430
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_PYRKO (Elongation factor 1-alpha OS=Pyrococcus kodakaraensis GN=tuf PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 8.102e-21 Identity = 43/90 (47.78%), Postives = 66/90 (73.33%), Query Frame = -3 Query: 276 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 545 GY PVL HT+ +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTK MV+E + P +GRFA+RDM QTVA G++ +++K D Sbjct: 339 GYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAD 428
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METJA (Elongation factor 1-alpha OS=Methanocaldococcus jannaschii GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.382e-20 Identity = 45/90 (50.00%), Postives = 64/90 (71.11%), Query Frame = -3 Query: 276 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 545 GY PV HT+ +A F EL+ K+D R+G+ +E+ P+FLK GDA +VK+ PTKPMV+E + P LGRFA+RDM T+A G+ +V+ K+ Sbjct: 338 GYTPVFHAHTAQVACTFIELLKKLDPRTGQVIEENPQFLKTGDAAIVKIKPTKPMVIENVREIPQLGRFAIRDMGMTIAAGMAIDVKAKN 427
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_ARCFU (Elongation factor 1-alpha OS=Archaeoglobus fulgidus GN=tuf PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.382e-20 Identity = 44/83 (53.01%), Postives = 60/83 (72.29%), Query Frame = -3 Query: 297 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 545 GY PV+ HT+ IA +F EL KID R+G+ E+ P+FLK GDA +VK+ PT+PMV+E D PP+GRFA+RDM T+ G++ Sbjct: 334 GYTPVVHAHTAQIACRFVELQKKIDPRTGQVKEENPQFLKTGDAAIVKLEPTRPMVIERVKDIPPMGRFAIRDMGMTIGAGMV 416
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_THEGJ (Elongation factor 1-alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tuf PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20 Identity = 42/90 (46.67%), Postives = 66/90 (73.33%), Query Frame = -3 Query: 276 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 545 GY PVL HT+ +AV+F +L+ K+D R+G +E+ P+F+K GD+ +V + PTK MV+E + P +GRFA+RDM QTVA G++ +++K + Sbjct: 339 GYTPVLHAHTTQVAVRFEQLLAKLDPRTGNIVEENPQFIKTGDSAIVILRPTKAMVIEPVKEIPQMGRFAIRDMGQTVAAGMVISIQKAE 428 The following BLAST results are available for this feature:
BLAST of DN617282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617282 ID=DN617282; Name=DN617282; organism=Citrus sinensis; type=EST; length=583bpback to top |