DN617282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METLZ (Elongation factor 1-alpha OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=tuf PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.357e-20 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = -3 Query: 279 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 545 GY PV CHTS A F+EL K+D RSG+ E+ P FLK GDA + + PT+P+V+ET + P LGRFAVRDM TVA G++ +V+ K Sbjct: 334 GYTPVFHCHTSQTACMFTELNKKLDPRSGQVKEENPAFLKAGDAAICTITPTRPLVIETAKELPQLGRFAVRDMGMTVAAGLVLSVKAK 422
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_IGNH4 (Elongation factor 1-alpha OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=tuf PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 5.252e-20 Identity = 44/90 (48.89%), Postives = 63/90 (70.00%), Query Frame = -3 Query: 285 IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVE 554 I GY PV+ HT+ +A + E+ KID R+GK +E+ P FLK GDA +V P KPMV+E F ++ PLGRFA+RDM +TV +G++ +V+ Sbjct: 343 IAVGYTPVIHAHTASVASRIIEIKQKIDPRTGKVIEENPSFLKPGDAAVVVFKPLKPMVIEKFQEFQPLGRFAMRDMGKTVGIGIVTDVK 432
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METVA (Elongation factor 1-alpha OS=Methanococcus vannielii GN=tuf PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.859e-20 Identity = 46/91 (50.55%), Postives = 63/91 (69.23%), Query Frame = -3 Query: 276 NGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 548 +GY PV HT+ IA F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 337 DGYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METB6 (Elongation factor 1-alpha OS=Methanoregula boonei (strain 6A8) GN=tuf PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 6.859e-20 Identity = 46/89 (51.69%), Postives = 59/89 (66.29%), Query Frame = -3 Query: 279 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 545 GY PV CHT+ A F EL K+D RSG+ E+ P FLK GDA +V++ PTKPMV+E + P LGRFAVRDM T+A G+ ++ K Sbjct: 334 GYTPVFHCHTTQTACTFIELKKKLDPRSGQTKEENPTFLKTGDAAIVQIKPTKPMVIENVKELPQLGRFAVRDMGSTIAAGMCIAIQPK 422
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METVS (Elongation factor 1-alpha OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=tuf PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 8.958e-20 Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 276 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKKD 545 GY PV HT+ IA F+E+ K++ +G+ LE+ P FLK GDA +VK+IPTKPMV+E+ + P LGRFA+RDM TVA G+ V K+ Sbjct: 338 GYTPVFHTHTAQIACTFAEIQKKLNPATGEVLEENPDFLKAGDAAIVKLIPTKPMVIESVKEIPQLGRFAIRDMGMTVAAGMAIQVTAKN 427
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METS3 (Elongation factor 1-alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=tuf PE=3 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 8.958e-20 Identity = 47/91 (51.65%), Postives = 59/91 (64.84%), Query Frame = -3 Query: 288 GQIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 560 G I GY PV CHTS +A F EL K+D +G+ E+ P FLK G+A VK+ PTKPMV+E P +GRFA+RDM QTVA G+ +V Sbjct: 319 GVITVGYTPVFHCHTSQVACTFLELTAKLDPATGQVAEENPDFLKTGNAAFVKVKPTKPMVIENAKKIPQMGRFAIRDMGQTVAAGLCIDV 409
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METTP (Elongation factor 1-alpha OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.170e-19 Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = -3 Query: 288 IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNV 554 I GY PV CHT+ +A +E+ K+D R+G E+ P F+K GDA ++ + PTKPMV+E + P LGRFA+RDM T+A G+ +NV Sbjct: 333 ISAGYTPVFHCHTAQVACTITEIKAKLDPRTGSVKEQNPAFIKTGDAAIISVRPTKPMVIEKVKEIPQLGRFAIRDMGMTIAAGMCQNV 421
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METPE (Elongation factor 1-alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=tuf PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.170e-19 Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = -3 Query: 279 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 545 GY PV CHT+ IA F EL K+D RSG+ E+ P FLK+GDA +V++ P++PMV+E+ + P LGRFA+RDM T+A G+ V+ K Sbjct: 334 GYTPVFHCHTAQIACTFVELRKKLDPRSGQTKEENPTFLKSGDAAIVQIKPSRPMVIESVKEIPQLGRFAIRDMGTTIAAGMCIAVQPK 422
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_NANEQ (Elongation factor 1-alpha OS=Nanoarchaeum equitans GN=tuf PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.528e-19 Identity = 43/89 (48.31%), Postives = 64/89 (71.91%), Query Frame = -3 Query: 279 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 545 GYAPVL HT+H+ V+F EL K++ +G+ +E+ P+ L+ G+A +VK+ P KP+V+E F P LGRFA+RDM +TVA+G+ + V K Sbjct: 339 GYAPVLHVHTAHVPVRFEELRGKVNPATGQVIEENPQALRPGEAAVVKLKPLKPVVIEPFDKIPQLGRFAIRDMGRTVAIGIARQVTPK 427
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_CENSY (Elongation factor 1-alpha OS=Cenarchaeum symbiosum GN=tuf PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.528e-19 Identity = 40/89 (44.94%), Postives = 63/89 (70.79%), Query Frame = -3 Query: 279 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 545 GY PV+ CHT+ +A SE V+KI+ +G E+ PKFLK GD+ ++K+ P +P +ETF ++P +GRFA+RDM T+A G++K + ++ Sbjct: 345 GYTPVMHCHTAQVAAIMSEFVSKINPATGAVEEENPKFLKVGDSAIIKIRPVRPTPIETFKEFPEMGRFALRDMGATIAAGIVKEITEE 433 The following BLAST results are available for this feature:
BLAST of DN617282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617282 ID=DN617282; Name=DN617282; organism=Citrus sinensis; type=EST; length=583bpback to top |