DN617282
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_PICTO (Elongation factor 1-alpha OS=Picrophilus torridus GN=tuf PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.435e-17 Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = -3 Query: 282 IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 554 I GY PV HT+ +A + E+V I+ + G L+++P F+K GD +VK++P + +V+E S++P LGRFA+RDM TVA G ++EK Sbjct: 333 IAAGYKPVFHVHTAQVACRIDEIVKTINPKDGTTLKEKPDFIKTGDIAIVKVVPDRALVIEKVSEFPQLGRFAIRDMGMTVAAGQCIDLEK 423
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_METBU (Elongation factor 1-alpha OS=Methanococcoides burtonii (strain DSM 6242) GN=tuf PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.211e-16 Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = -3 Query: 279 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 545 GY PV CHT+ A + K+D +SG+ E+ P ++K GDA +V + PT+PM +E S+ P LGRFA+RDM T+A G+ +V +K Sbjct: 333 GYTPVFHCHTAQTACTLMAINKKLDPKSGQVKEENPTYIKAGDAAIVTIKPTRPMCIEPVSEIPQLGRFAIRDMGMTIAAGMCMSVTQK 421
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_HALMA (Elongation factor 1-alpha OS=Haloarcula marismortui GN=tuf PE=1 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 7.848e-16 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = -3 Query: 279 IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 554 I GY PV HT+ +A + KID SG+ E+ P F++NGDA +V + P KP+ +E S+ P LG FA+RDM QT+A G + V ++ Sbjct: 330 ITEGYTPVFHAHTAQVACTVESIDKKIDPSSGEVAEENPDFIQNGDAAVVTVRPQKPLSIEPSSEIPELGSFAIRDMGQTIAAGKVLGVNER 421
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_HALWD (Elongation factor 1-alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=tuf PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.339e-15 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = -3 Query: 279 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 545 GY PV HT+ +A + K+D SG+ E++P F+K+GDA +V + P KP+ +E ++ P LG FAVRDM QT+A G + V+++ Sbjct: 333 GYTPVFHAHTAQVACTIESIDQKLDPASGEVAEEDPDFIKSGDAAVVTVRPQKPLSIEPSNEIPELGSFAVRDMGQTIAAGKVLEVDER 421
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_NATPD (Elongation factor 1-alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=tuf PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 2.982e-15 Identity = 37/89 (41.57%), Postives = 57/89 (64.04%), Query Frame = -3 Query: 279 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEKK 545 GY PV HT+ +A + KID SG+ E+ P F+++GDA +V + P KP+ +E+ ++ P LG FA+RDM QTVA G + +V ++ Sbjct: 334 GYTPVFHAHTAQVACTIESIDKKIDPSSGEVAEENPDFIQSGDAAVVTVRPQKPLSIESSNEIPELGSFAIRDMGQTVAAGKVLSVNER 422
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_GIALA (Elongation factor 1-alpha (Fragment) OS=Giardia lamblia GN=TEF1 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 3.895e-15 Identity = 38/76 (50.00%), Postives = 51/76 (67.11%), Query Frame = -3 Query: 330 QIGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVR 557 +I GY PV+DCHT+HIA +F + K+D+R+ K + P GD +VKM+P KP+ ETF+DY PLG FAVR Sbjct: 321 KIQPGYTPVIDCHTAHIACQFQLFLQKLDKRTLKPEMENPPDAGRGDCIIVKMVPQKPLCCETFNDYAPLGPFAVR 396
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_HALSA (Elongation factor 1-alpha OS=Halobacterium salinarium GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = -3 Query: 282 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 545 GY PV HT+ +A + K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + +V++ Sbjct: 333 GYTPVFHAHTAQVACTIESIDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: EF1A_HALS3 (Elongation factor 1-alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tuf PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 8.677e-15 Identity = 37/88 (42.05%), Postives = 56/88 (63.64%), Query Frame = -3 Query: 282 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVIKNVEK 545 GY PV HT+ +A + K+D SG+ E+ P F+++GDA +V + P KP+ +E S+ P LG FAVRDM QT+A G + +V++ Sbjct: 333 GYTPVFHAHTAQVACTIESIDKKMDPASGETQEENPDFIQSGDAAVVTVRPQKPLSLEPSSEIPELGSFAVRDMGQTIAAGKVLDVDE 420
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: ERF3_CANMA (Eukaryotic peptide chain release factor GTP-binding subunit OS=Candida maltosa GN=SUP35 PE=3 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 5.820e-11 Identity = 32/86 (37.21%), Postives = 53/86 (61.63%), Query Frame = -3 Query: 297 IGNGYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVGVI 554 + NG++ V+ HT+ VKF EL K+++ + ++ +K P F K G + + ++P+ ET+ DYP LGRF +RD T+A+G I Sbjct: 623 LSNGFSCVMHLHTAIEEVKFVELKHKLEKGTNRKSKKPPAFAKKGMKIIAILEVSEPVCAETYKDYPQLGRFTLRDQGTTIAIGKI 708
BLAST of DN617282 vs. ExPASy Swiss-Prot
Match: ERF3B_PONAB (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B OS=Pongo abelii GN=GSPT2 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 7.601e-11 Identity = 32/91 (35.16%), Postives = 57/91 (62.64%), Query Frame = -3 Query: 276 GYAPVLDCHTSHIAVKFSELVTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSDYPPLGRFAVRDMRQTVAVG-VIKNVEKKD 545 GY VL HT V+ + L++ +D++SG++ + P+F+K + ++ + +ETF D+P +GRF +RD +T+A+G V+K V +KD Sbjct: 538 GYNAVLHIHTCIEEVEITALISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD 628 The following BLAST results are available for this feature:
BLAST of DN617282 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 163
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Sequences
The
following sequences are available for this feature:
EST sequence >DN617282 ID=DN617282; Name=DN617282; organism=Citrus sinensis; type=EST; length=583bpback to top |