DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_ARATH (Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana GN=COX2 PE=1 SV=2) HSP 1 Score: 267.7 bits (683), Expect = 3.761e-71 Identity = 130/162 (80.25%), Postives = 135/162 (83.33%), Query Frame = 3 Query: 174 LLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 +L+WLF TI+PCDAAEPWQLGFQDAATP+MQG VRALWHFHYKKN IPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSL FDSYMIPE+DLELGQLRLL V Sbjct: 3 VLKWLFFTISPCDAAEPWQLGFQDAATPIMQGIIDLHHDIFFFLILILVFVLWILVRALWHFHYKKNAIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEEDLELGQLRLLEV 164
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_OENBE (Cytochrome c oxidase subunit 2 OS=Oenothera bertiana GN=COX2 PE=3 SV=3) HSP 1 Score: 261.536 bits (667), Expect = 2.696e-69 Identity = 129/160 (80.62%), Postives = 132/160 (82.50%), Query Frame = 3 Query: 180 EWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 E LF TIA CDAAEPWQLGFQDAATPMMQG VRALWHF+YKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPA+T+KAIGHQWYWTYEYSDYNSSDEQSL FDSYMIPEDDLELGQLRLL V Sbjct: 5 ECLFFTIALCDAAEPWQLGFQDAATPMMQGIIDLHHDILFFLILILVFVLWILVRALWHFYYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAMTLKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEV 164
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_SOYBN (Cytochrome c oxidase subunit 2 OS=Glycine max GN=COX2 PE=3 SV=2) HSP 1 Score: 258.07 bits (658), Expect = 2.980e-68 Identity = 130/160 (81.25%), Postives = 130/160 (81.25%), Query Frame = 3 Query: 180 EWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 EWLFLTIAPCDAAEPWQLGFQDAATPMMQG VRALWHFHYKKNPIPQRIVHGTTIEIL TIFPSII MFIAIPSFALLYSMDEVVVDPAITIKAIGHQWY TYEYSDYNSSDEQSL FDSY IPEDDLELGQ RLL V Sbjct: 4 EWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWHFHYKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSRLLEV 163
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_MAIZE (Cytochrome c oxidase subunit 2 OS=Zea mays GN=COX2 PE=2 SV=4) HSP 1 Score: 256.144 bits (653), Expect = 1.133e-67 Identity = 127/166 (76.51%), Postives = 134/166 (80.72%), Query Frame = 3 Query: 162 MIVRLLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 MI+RLLE F TIA CDAAEPWQLGFQDAATPMMQG VRALWHF+ + NPIPQRIVHGTTIEI+WTIFPS+IL+FIAIPSFALLYSMD V+VDPAITIKAIGHQWYWTYEYSDYNSSDEQSL FDSYMIPEDDLELGQLRLL V Sbjct: 1 MILRLLECRFFTIALCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWMLVRALWHFNEQTNPIPQRIVHGTTIEIIWTIFPSVILLFIAIPSFALLYSMDGVLVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEV 166
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_BETVU (Cytochrome c oxidase subunit 2 OS=Beta vulgaris GN=COX2 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 2.523e-67 Identity = 130/166 (78.31%), Postives = 133/166 (80.12%), Query Frame = 3 Query: 162 MIVRLLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 MIVR EWLF T+APCDAAEPWQLGFQDAATPMMQG VRALWHFHYKKNPIPQRIVHGTTIEI+ TIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWY +YEYSDYNSSDEQSL FDSY IPEDD ELGQ RLL V Sbjct: 1 MIVR--EWLFFTMAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSWILVRALWHFHYKKNPIPQRIVHGTTIEIIRTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYRSYEYSDYNSSDEQSLTFDSYTIPEDDPELGQSRLLEV 164
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_PEA (Cytochrome c oxidase subunit 2 OS=Pisum sativum GN=COX2 PE=3 SV=2) HSP 1 Score: 251.906 bits (642), Expect = 2.136e-66 Identity = 127/161 (78.88%), Postives = 129/161 (80.12%), Query Frame = 3 Query: 177 LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 LEWLFLTIAPCDAAEPWQLGFQDAATPMMQG VRALWHFHYKKNPIPQRIVHGTTIEIL TIFPSII MFIAIPSFALLYSMD V+VDPA+TIKAIGHQWY TYEYSDYNSSDEQSL FDSY IPEDDLELGQ LL V Sbjct: 3 LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWHFHYKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDGVLVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDLELGQSGLLEV 163
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COXT_SOYBN (Cytochrome c oxidase subunit 2, mitochondrial (Fragment) OS=Glycine max GN=COX2 PE=3 SV=1) HSP 1 Score: 251.521 bits (641), Expect = 2.790e-66 Identity = 122/165 (73.94%), Postives = 132/165 (80.00%), Query Frame = 3 Query: 165 IVRLLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 + R ++ + TIAPCDAAEPWQLGFQDAATP+MQG +RALWHF K NPIPQRIVHGTTIEILWTIFPS+ILMFIAIPSFALLYSMD++VVDPAITIKAIGHQWYWTYEYSDYN+SDEQSL FDSYMIPEDDLELGQLRLL V Sbjct: 140 VSRWMDQVIPTIAPCDAAEPWQLGFQDAATPIMQGIIDLHHDIFFFVIQIGVFVSWVLLRALWHFRSKMNPIPQRIVHGTTIEILWTIFPSVILMFIAIPSFALLYSMDDIVVDPAITIKAIGHQWYWTYEYSDYNNSDEQSLAFDSYMIPEDDLELGQLRLLEV 304
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_MARPO (Cytochrome c oxidase subunit 2 OS=Marchantia polymorpha GN=COX2 PE=3 SV=3) HSP 1 Score: 249.98 bits (637), Expect = 8.116e-66 Identity = 126/161 (78.26%), Postives = 130/161 (80.75%), Query Frame = 3 Query: 177 LEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 L W+F IA CDAAEPWQLGFQD ATPMMQG VRALWHFHYK+NPIP+RIVHGTTIEI+WTIFPSIILMFIAIPSFALLYSMDE VVDPAITIKAIGHQWYWTYEYSDYNSSDEQSL FDSYMIPEDDLELGQLRLL V Sbjct: 3 LIWIF-PIAFCDAAEPWQLGFQDPATPMMQGIIDLHNDIFFFLIVILIFVLWMLVRALWHFHYKRNPIPERIVHGTTIEIIWTIFPSIILMFIAIPSFALLYSMDE-VVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEDDLELGQLRLLEV 161
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_WHEAT (Cytochrome c oxidase subunit 2 OS=Triticum aestivum GN=COX2 PE=2 SV=2) HSP 1 Score: 246.128 bits (627), Expect = 1.172e-64 Identity = 123/166 (74.10%), Postives = 130/166 (78.31%), Query Frame = 3 Query: 162 MIVRLLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 MI+R L FLTIA CDAAEPWQLGFQDAATPMMQG VRALWHF+ + NPIPQRIVHGTTIEI+WTIFPS+IL+FIAIPSFALLYSMD V+VDPAITIKAIGHQWYWTYEYSDYNSSDEQSL FDSY IPEDD ELGQ RLL V Sbjct: 1 MILRSLSCRFLTIALCDAAEPWQLGFQDAATPMMQGIIDLHHDIFFFLILILVFVLWMLVRALWHFNEQTNPIPQRIVHGTTIEIIWTIFPSVILLFIAIPSFALLYSMDGVLVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYTIPEDDPELGQSRLLEV 166
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_DAUCA (Cytochrome c oxidase subunit 2 OS=Daucus carota GN=COX2 PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.529e-61 Identity = 120/157 (76.43%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 189 FLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 F T +PCDAAEPWQLG QDAATPMMQG VRALWHFH KKNPIPQRIVHGTTIEIL TIFPSII MFIAIPSFALLYSMDEVVVDPA+TIKAIGHQWY TYEYSDYNSSDEQSL FDSY IPEDD ELGQ RLL V Sbjct: 9 FFTNSPCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILILVFVSRILVRALWHFHSKKNPIPQRIVHGTTIEILRTIFPSIIPMFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDDPELGQSRLLEV 165 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |