DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_VIGUN (Cytochrome c oxidase subunit 2, mitochondrial (Fragment) OS=Vigna unguiculata GN=COX2 PE=2 SV=2) HSP 1 Score: 234.187 bits (596), Expect = 4.609e-61 Identity = 119/170 (70.00%), Postives = 127/170 (74.71%), Query Frame = 3 Query: 159 QMIVRLLEWL---FLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 + I R L W+ F IA CDA EPWQLGFQDAATP+MQG RALW F K +PIPQRIVHGTTIEILWTI PSIILMFIAIPSF LLYSMD+VVVDPAITIKAIGHQWYW+YEYSDYN+SDEQSL FDSYM+PEDDLELGQLRLL V Sbjct: 117 EKIPRALRWMCGGFPAIALCDAPEPWQLGFQDAATPIMQGIMDLHHDIFFFLVQILVFVLWVLSRALWCFRSKISPIPQRIVHGTTIEILWTILPSIILMFIAIPSFTLLYSMDDVVVDPAITIKAIGHQWYWSYEYSDYNNSDEQSLAFDSYMVPEDDLELGQLRLLEV 286
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_ORYSJ (Cytochrome c oxidase subunit 2 OS=Oryza sativa subsp. japonica GN=COX2 PE=3 SV=4) HSP 1 Score: 229.95 bits (585), Expect = 8.692e-60 Identity = 119/166 (71.69%), Postives = 127/166 (76.51%), Query Frame = 3 Query: 162 MIVRLLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 MI+R LE FLTIA CDAAEPWQLG QDAATPMMQG VRALWHF+ + NPIPQRIVHGTTIEI+ TIFPS+I +FIAIPSFALLYSMD V+VDPAITIKAIGHQWY +YEYSDYNSSDEQSL FDSY IPEDD ELGQ RLL V Sbjct: 1 MILRSLECRFLTIALCDAAEPWQLGSQDAATPMMQGIIDLHHDIFFFLILILVFVSRMLVRALWHFNEQTNPIPQRIVHGTTIEIIRTIFPSVIPLFIAIPSFALLYSMDGVLVDPAITIKAIGHQWYRSYEYSDYNSSDEQSLTFDSYTIPEDDPELGQSRLLEV 166
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CHOCR (Cytochrome c oxidase subunit 2 OS=Chondrus crispus GN=COX2 PE=3 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 5.660e-43 Identity = 79/150 (52.67%), Postives = 102/150 (68.00%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D AE WQ+GFQD ATP+M+G R LWHF +N IP + HGT IE++WT+ P+ IL+ IA+PSF+LLY+MDE++ PAITIK +GHQWYW+YEYSDY + D+ S+ +DSYMIPE+DLE+GQ RLL V Sbjct: 15 DVAENWQIGFQDPATPIMEGIINLHYDLMFFICVISVFVSWMLGRTLWHFEQNQNKIPSSLTHGTLIEMIWTVTPAFILLIIAVPSFSLLYAMDEII-SPAITIKTLGHQWYWSYEYSDYLNEDDDSINYDSYMIPEEDLEIGQFRLLEV 163
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CYACA (Cytochrome c oxidase subunit 2 OS=Cyanidium caldarium GN=COX2 PE=3 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.541e-40 Identity = 79/150 (52.67%), Postives = 102/150 (68.00%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 DAA PWQ+GFQD ATP+M+G R L+ F+ K NP+ HGT IE+LWT+ PS++L+ IA+PSFALLYS+DE++ DPAITIKA+G QWYW+YEYSDY + + + L F SY++PE+DLELGQ RLL V Sbjct: 16 DAARPWQIGFQDPATPIMEGIVNLHHDIIFFLIIIIIFVSWILFRTLFLFNSKTNPVAYNFSHGTFIELLWTLTPSLVLIGIAVPSFALLYSIDEII-DPAITIKAVGRQWYWSYEYSDYVNEENEFLAFHSYILPEEDLELGQFRLLEV 164
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_PHYME (Cytochrome c oxidase subunit 2 OS=Phytophthora megasperma GN=COX2 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 4.485e-40 Identity = 81/150 (54.00%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D AEPWQLGFQD ATP+M+G R + F KKN IP +VHG TIEI+WT P++IL+ +A+PSFALLYSMDEV+ DP IT+K IG QWYW+YEYSD ++ LIFDSYMI EDDL +GQ R+L V Sbjct: 15 DMAEPWQLGFQDPATPVMEGIINFHHDLMFFLISIVVFVCWMLFRVITLFDEKKNKIPATVVHGATIEIIWTSIPALILLTVAVPSFALLYSMDEVI-DPIITLKVIGSQWYWSYEYSDNLEFSDEPLIFDSYMIQEDDLAIGQFRILEV 163
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_USTMA (Cytochrome c oxidase subunit 2 OS=Ustilago maydis GN=COX2 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.495e-32 Identity = 68/151 (45.03%), Postives = 94/151 (62.25%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 DA +PWQ+GFQD A+P +G + +F+ K+ + + HGT IE++WTI P+++L+ IA PSF LLY MDEV+ P++T+K GHQWYW+ EYSD+ + D +S+ FDSYM+PE DLE GQLRLL V Sbjct: 17 DAPQPWQVGFQDGASPTQEGITELHDSIFFYLVIICFGVLWVLSSVIVNFNSNKSQLVYKYANHGTLIELIWTITPALVLIAIAFPSFKLLYLMDEVI-SPSMTVKVAGHQWYWSAEYSDFINEDGESIEFDSYMVPETDLEDGQLRLLEV 166
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX1_DICDI (Cytochrome c oxidase subunit 1+2 OS=Dictyostelium discoideum GN=cox1/2 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 7.667e-32 Identity = 76/163 (46.63%), Postives = 94/163 (57.67%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYK------------KN-PIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D A WQ+GFQD ATP+M+G R LW F YK KN +I+HGT IEI+WT+ P++IL IAIPSF LLY+MDE +++P +TIK IGHQWYW+YEY D S+ + FDSYM+ E DL GQLRLL V Sbjct: 518 DFARDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFSYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDE-IINPTVTIKIIGHQWYWSYEYGDNASN---LIEFDSYMVYERDLAEGQLRLLEV 676
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX1_DICCI (Cytochrome c oxidase subunit 1+2 OS=Dictyostelium citrinum GN=cox1/2 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.001e-31 Identity = 75/163 (46.01%), Postives = 95/163 (58.28%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYK------------KN-PIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D + WQ+GFQD ATP+M+G R LW F YK KN +I+HGT IEI+WT+ P++IL IAIPSF LLY+MDE +++P +TIK IGHQWYW+YEY D +S+ + FDSYM+ E DL GQLRLL V Sbjct: 528 DFSRDWQIGFQDPATPIMEGIIDLHNYIFFYLIVVAVFIGWVMGRILWRFAYKWSYPTIGDIEIFKNFTAYNQIIHGTVIEIVWTLIPTVILYLIAIPSFTLLYAMDE-IINPTVTIKIIGHQWYWSYEYGDNSSN---LVEFDSYMVYERDLNEGQLRLLEV 686
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_EMENI (Cytochrome c oxidase subunit 2 OS=Emericella nidulans GN=cox2 PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.708e-31 Identity = 66/151 (43.71%), Postives = 93/151 (61.59%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 DA PW + FQD+A+P M+G + + +F KK+PI + + HGT IE++WTI P+ IL+ IA PSF LLY MDEV+ DP++ + A GHQWYW+Y+Y D+ + D + + FDSY++PE DLE GQ R+L V Sbjct: 13 DAPTPWGIFFQDSASPQMEGIMELHNNIMFYLAIILFTVTWMMITIIRNFVAKKSPIAHKYMNHGTLIELIWTITPAFILILIAFPSFKLLYLMDEVM-DPSLVVYAEGHQWYWSYQYPDFTNEDNEFIEFDSYIVPESDLEEGQFRMLEV 162
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_METSE (Cytochrome c oxidase subunit 2 OS=Metridium senile GN=COII PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.231e-31 Identity = 76/162 (46.91%), Postives = 94/162 (58.02%), Query Frame = 3 Query: 174 LLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 L WL + D EPWQLG QDAA P+M+ V+AL Y + +V GT +EI+WTI P+IIL+ IA PS LLY MDEV+ DPA+TIKAIGHQWYW+YEYSDY + ++L FDSYM+P +L G RLL V Sbjct: 5 LNNWLIINQFGYDLPEPWQLGLQDAAHPVMEEIIFFHDQVMFILIIIITTVLWLIVKALSGKAYHRY-----LVDGTLLEIIWTIVPAIILILIAFPSLKLLYLMDEVM-DPALTIKAIGHQWYWSYEYSDYQT---ETLEFDSYMVPTSELNKGDFRLLEV 157 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |