DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_MACCA (Cytochrome c oxidase subunit 2 OS=Macrotus californicus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.981e-23 Identity = 61/148 (41.22%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLGFQDA +P+M+ L N + +E +WTI P+IIL+ IA+PS +LY MDE+ +PA+TIK +GHQWYW+YEY+DY+ L FDSYM+P DL+ G+LRLL V Sbjct: 2 AYPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISAML-----TTNLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEIN-NPAMTIKTMGHQWYWSYEYTDYH-----DLSFDSYMVPTSDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_LOPFL (Cytochrome c oxidase subunit 2 OS=Lophuromys flavopunctatus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.981e-23 Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA++P+M+ + + + ++ H +T +E +WT+ P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY +SL FDSYM+P +DL+ G+LRLL V Sbjct: 2 AYPFQLGLQDASSPIMEELTNFHDHTLMIVFLISSLV----------LYIISSMLTTKMTHTSTMDAQEVETIWTVLPAVILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----ESLCFDSYMVPTNDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CYPCA (Cytochrome c oxidase subunit 2 OS=Cyprinus carpio GN=mt-co2 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.981e-23 Identity = 61/146 (41.78%), Postives = 81/146 (55.48%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 A P QLGF+DAA P+M+ + + I+ IEI+WTI P++IL+ IA+PS +LY MDE+ DP +TIKA+GHQWYW+YEY+DY ++L FDSYM+P DL GQ RLL Sbjct: 2 AHPTQLGFKDAAMPVMEELLHFHDHALMIVLLISTLVLYIITAMV-----STKLTNKYILDSQEIEIVWTILPAVILVLIALPSLRILYLMDEIN-DPHLTIKAMGHQWYWSYEYTDY-----ENLGFDSYMVPTQDLAPGQFRLL 136
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_TAMQA (Cytochrome c oxidase subunit 2 OS=Tamias quadrimaculatus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23 Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P++LGFQDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ DP++T+K +GHQWYW+YEY+DY + L FDSYM+P DL G+LRLL V Sbjct: 2 AYPFELGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEIN-DPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMVPTSDLSPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_RHIUN (Cytochrome c oxidase subunit 2 OS=Rhinoceros unicornis GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23 Identity = 62/153 (40.52%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++TIK +GHQWYW+YEY+DY + L FDSYMIP DL+ G+LRLL V Sbjct: 2 AYPLQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEIN-NPSLTIKTMGHQWYWSYEYTDY-----EDLTFDSYMIPTSDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_RHIDA (Cytochrome c oxidase subunit 2 OS=Rhinolophus darlingi GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23 Identity = 61/153 (39.87%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLGFQDA +P+M+ L + H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP DL+ G+LRLL V Sbjct: 2 AHPFQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLLL----------TTSLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLSFDSYMIPTSDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_MALLO (Cytochrome c oxidase subunit 2 OS=Malacomys longipes GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23 Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ + + + ++ H +T +E +WTI P++IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYM+P +DL+ G LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELANFHDHTLMIVFLISSLV----------LYIISSMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLCFDSYMVPTNDLKPGDLRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_HYLPR (Cytochrome c oxidase subunit 2 OS=Hylomyscus parvus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23 Identity = 59/153 (38.56%), Postives = 85/153 (55.56%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA++P+M+ L ++ H +T +E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYM+P DDL+ G+LRLL V Sbjct: 2 AYPFQLGLQDASSPIMEELINFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMVPTDDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_TATRO (Cytochrome c oxidase subunit 2 OS=Tatera robusta GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 8.497e-23 Identity = 60/148 (40.54%), Postives = 83/148 (56.08%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ V L I + +E +WTI P+IIL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYMIP ++L+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIME-----ELTNFHDHTLMIVFLISSLVLYLISLMLSTKLIHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLSFDSYMIPTNELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_SQUAC (Cytochrome c oxidase subunit 2 OS=Squalus acanthias GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 8.497e-23 Identity = 62/146 (42.47%), Postives = 81/146 (55.48%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 A P QLGFQDAA+P+M+ + + + I+ IEI+WTI P++IL+ IA+PS +LY MDE+ DP +TIKA+GHQWYW+YEY+DY + L FDSYMI DL GQ RLL Sbjct: 2 AHPSQLGFQDAASPVMEELLHFHDHTLMIVFLISTLVLYIIMAMV-----STKLTNKYILDSQEIEIVWTILPAVILIMIALPSLRILYLMDEIN-DPHLTIKAMGHQWYWSYEYTDY-----EDLGFDSYMIQTQDLTPGQFRLL 136 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |