DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_BISBI (Cytochrome c oxidase subunit 2 OS=Bison bison GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22 Identity = 61/153 (39.87%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P +T+KA+GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEIN-NPFLTVKAMGHQWYWSYEYTDY-----EDLSFDSYMIPTSELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_SHEEP (Cytochrome c oxidase subunit 2 OS=Ovis aries GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAIILIMIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLSFDSYMIPTSELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_RAT (Cytochrome c oxidase subunit 2 OS=Rattus norvegicus GN=Mtco2 PE=2 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_MOUSE (Cytochrome c oxidase subunit 2 OS=Mus musculus GN=Mtco2 PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_MAXBA (Cytochrome c oxidase subunit 2 OS=Maxomys bartelsii GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_LEMBA (Cytochrome c oxidase subunit 2 OS=Lemniscomys barbarus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P+ IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAAILILIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_GEOCP (Cytochrome c oxidase subunit 2 OS=Georychus capensis GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 61/153 (39.87%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P +T+K +GHQWYWTYEY+DY + L FDSYM+P DL G+LRLL V Sbjct: 2 AYPHQLGFQDATSPIMEELLSFHDHTLMIVFLISSLVLYLISLML----------TTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEIN-NPLLTVKTMGHQWYWTYEYTDY-----EELNFDSYMVPTTDLNPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_GAZSP (Cytochrome c oxidase subunit 2 OS=Gazella spekei GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLML----------TTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLSFDSYMIPTSELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CHICK (Cytochrome c oxidase subunit 2 OS=Gallus gallus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 57/144 (39.58%), Postives = 78/144 (54.17%), Query Frame = 3 Query: 228 QLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 QLGFQDA++P+M+ L + V +E++WTI P+I+L+ +A+PS +LY MDE+ +P +T+KAIGHQWYWTYEY+D+ + L FDSYM P DL LG RLL V Sbjct: 6 QLGFQDASSPIMEELVEFHDHALMVALAICSLVLYLLTLMLME------KLSSNTVDAQEVELIWTILPAIVLVLLALPSLQILYMMDEID-EPDLTLKAIGHQWYWTYEYTDF-----KDLSFDSYMTPTTDLPLGHFRLLEV 137
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CERUN (Cytochrome c oxidase subunit 2 OS=Cervus unicolor GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYVISLML----------TTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLSFDSYMIPTSELKPGELRLLEV 138 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |