DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_ACOWI (Cytochrome c oxidase subunit 2 OS=Acomys wilsoni GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.472e-22 Identity = 57/153 (37.25%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTI-----EILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ + + + ++ H +T+ E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYM+P +DL+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLV----------LYIISSMLATKMTHTSTMDAQSMETIWTILPAVILVLIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMVPTNDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_SYNCA (Cytochrome c oxidase subunit 2 OS=Syncerus caffer GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYM+P +L+ G+LRLL V Sbjct: 2 AYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLSFDSYMVPTSELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_SPEVE (Cytochrome c oxidase subunit 2 OS=Speothos venaticus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ + + + ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLV----------LYIISSMLTTKLTHTSTMDAQEVETVWTILPAIILVLIALPSLRILYMMDEIN-NPSLTVKTLGHQWYWSYEYTDY-----EDLNFDSYMIPTQELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_HIPAM (Cytochrome c oxidase subunit 2 OS=Hippopotamus amphibius GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 60/153 (39.22%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ L ++ H T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYM+P DL+ G LRLL V Sbjct: 2 AYPLQLGFQDAVSPIMEELLYFHDHTLMIVFLISSLVLYIITLML----------TTKLTHTNTMNAQEVETVWTILPAIILILIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMVPTSDLKPGDLRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_DESAU (Cytochrome c oxidase subunit 2 OS=Desmodillus auricularis GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 59/148 (39.86%), Postives = 81/148 (54.73%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLG QDA +P+M+ V L I + +E +WTI P+IIL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP ++L+ G+LRLL V Sbjct: 2 AYPMQLGLQDATSPIME-----ELMNFHDHTLMIVFLISSLVLYLISLMLTTKLIHTNTMDAQEVETIWTILPAIILVLIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_DACMI (Cytochrome c oxidase subunit 2 OS=Dacnomys millardi GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 58/153 (37.91%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYM+P +DL+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMVPTNDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CHEME (Cytochrome c oxidase subunit 2 OS=Cheirogaleus medius GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 59/151 (39.07%), Postives = 82/151 (54.30%), Query Frame = 3 Query: 222 PWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 P QLGFQDAA+P+M+ L + H +T +E +WTI P++IL+ IA+PS +LY MDE+ P++T+K +GHQWYW+YEY+DY ++L FDSYM P DL+ G+LRLL V Sbjct: 4 PVQLGFQDAASPIMEELTYFHDHTLMIVFLISSLVLYIISLML----------TTELTHTSTMDAQEVETVWTILPAVILILIALPSLRILYMMDEITT-PSLTLKTMGHQWYWSYEYTDY-----ENLCFDSYMTPSSDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CAPHI (Cytochrome c oxidase subunit 2 OS=Capra hircus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 60/153 (39.22%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLSFDSYMIPTSELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_APOSY (Cytochrome c oxidase subunit 2 OS=Apodemus sylvaticus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 59/153 (38.56%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP DL+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTSDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_APOSM (Cytochrome c oxidase subunit 2 OS=Apodemus semotus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.229e-22 Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P++IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP +DL+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISTLVLYIISLML----------TTKLTHTSTMDAQEVETVWTILPAVILIMIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNDLKPGELRLLEV 138 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |