DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_MERSH (Cytochrome c oxidase subunit 2 OS=Meriones shawi GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21 Identity = 58/153 (37.91%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLG QDA++P+M+ L +++H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYM P ++L+ G+LRLL V Sbjct: 2 AYPLQLGLQDASSPIMEELTNFHDHTLMIVFLISSLVLYLISLML----------TTKLIHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMTPTNELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_MAMPR (Cytochrome c oxidase subunit 2 OS=Mammuthus primigenius GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21 Identity = 58/148 (39.19%), Postives = 82/148 (55.41%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLGFQDA +P+M+ + L + +++ +E++WTI P+IIL+ IA+PS LY MDE+ +P +TIK +GHQW+W+YEY+DY + L FDSYMI D L+ G+LRLL V Sbjct: 2 AYPLQLGFQDATSPVMEELLHFHDHTLMIIFLISSLVLYIIMLML-----TTKLVHTNMMNVQEMEMIWTILPAIILILIALPSLHTLYMMDEIN-NPLLTIKTMGHQWFWSYEYTDY-----EDLAFDSYMITTDSLKFGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_ACOIG (Cytochrome c oxidase subunit 2 OS=Acomys ignitus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.602e-21 Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLG QDA +P+M+ + + + ++ H T +E +WTI P+ IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYM P DL+ G+LRLL V Sbjct: 2 AYPLQLGLQDATSPIMEELTSFHDHTLMIVFLISSLV----------LYIISSMLTTKMTHTNTMDAQGVETIWTILPAAILVLIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLYFDSYMTPTSDLKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_YPOMA (Cytochrome c oxidase subunit 2 OS=Yponomeuta malinellus GN=COII PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.093e-21 Identity = 47/90 (52.22%), Postives = 67/90 (74.44%), Query Frame = 3 Query: 390 IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 ++ G IE++WTI P+I L+FIA+PS LLY +DE+ +P IT+K+IGHQWYW+YEYSD+N ++ FDSYMIP +++ + RLL V Sbjct: 55 LLEGQMIELIWTILPAITLIFIALPSLRLLYLLDELN-NPLITLKSIGHQWYWSYEYSDFN-----NIQFDSYMIPSKEMKFNEFRLLDV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_TACSP (Cytochrome c oxidase subunit 2 OS=Tachyoryctes splendens GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.093e-21 Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P Q G QDA +P+M+ L ++ H +T +E +WTI P++IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPLQYGLQDATSPIMEELLHFHDHTLMIVFLISFLVLYVIFAML----------STKLTHTSTMDAQEVETIWTILPAVILVLIALPSLRILYMMDEIY-NPALTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTTELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_PERAM (Cytochrome c oxidase subunit 2 OS=Periplaneta americana GN=COII PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.093e-21 Identity = 47/90 (52.22%), Postives = 64/90 (71.11%), Query Frame = 3 Query: 390 IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 ++ G IE+ WTI P++IL+FIA+PS LLY MDE+ P +T+K IGHQWYW+YEYSD+ + FDSYMIP+D+++ RLL V Sbjct: 55 LLEGQMIELAWTIAPAVILIFIAVPSLRLLYLMDEINT-PTVTLKTIGHQWYWSYEYSDFAKVE-----FDSYMIPQDEMDHSMFRLLDV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_LYCPI (Cytochrome c oxidase subunit 2 OS=Lycaon pictus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.093e-21 Identity = 59/153 (38.56%), Postives = 84/153 (54.90%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETVWTILPAIILISIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTQELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_LEGFO (Cytochrome c oxidase subunit 2 OS=Leggadina forresti GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.093e-21 Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P+ IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP ++L+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAAILILIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_RHAPU (Cytochrome c oxidase subunit 2 OS=Rhabdomys pumilio GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.733e-21 Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P+ IL+ IA+PS +LY MDE+ +PA+T+K +GHQWYW+YEY+DY + L FDSYM P ++L+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAAILVLIALPSLRILYMMDEIN-NPALTVKTMGHQWYWSYEYTDY-----EDLCFDSYMTPTNELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_COTJA (Cytochrome c oxidase subunit 2 OS=Coturnix coturnix japonica GN=MT-CO2 PE=3 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 2.733e-21 Identity = 55/144 (38.19%), Postives = 77/144 (53.47%), Query Frame = 3 Query: 228 QLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 QLGFQDA++P+M+ L + V +E++WTI P+I+L+ +A+PS +LY MDE+ +P +T+KAIGHQWYW+YEY+D+ + L FDSYM P DL G RLL V Sbjct: 6 QLGFQDASSPIMEELVEFHDHALMVALAICSLVLYLLTLML------TQKLSSNTVDAQEVELIWTILPAIVLVLLALPSLQILYMMDEIE-EPDLTLKAIGHQWYWSYEYTDF-----KDLSFDSYMTPTTDLPQGHFRLLEV 137 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |