DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CONPN (Cytochrome c oxidase subunit 2 OS=Conilurus penicillatus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.733e-21 Identity = 57/153 (37.25%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P+ IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYM+P ++L+ G+LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAAILVLIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMVPTNELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_APTAU (Cytochrome c oxidase subunit 2 (Fragment) OS=Apteryx australis GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.733e-21 Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = 3 Query: 393 VHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 V +E++WTI P+I+L+ +A+PS +LY MDE+ +P +T+KAIGHQWYWTYEY+D+ + L FDSYMIP +L LG RLL V Sbjct: 23 VDAQEVELVWTILPAIVLILLALPSLQILYMMDEID-EPDLTLKAIGHQWYWTYEYTDF-----KDLSFDSYMIPTSELPLGHFRLLEV 105
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_VULCO (Cytochrome c oxidase subunit 2 OS=Vulpes corsac GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21 Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG DA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPFQLGLXDATSPIMEELLHFHDHTLMIVFLISSLVLYIITLML----------TTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTQELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_UROCA (Cytochrome c oxidase subunit 2 OS=Uromys caudimaculatus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21 Identity = 58/153 (37.91%), Postives = 82/153 (53.59%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P+QLG QDA +P+M+ L ++ H +T +E +WTI P+ IL+ IA+PS +LY MDE+ +P +T+K +GHQWYW+YEY+DY + L FDSYMIP ++L+ G LRLL V Sbjct: 2 AYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETIWTILPAAILVLIALPSLRILYMMDEIN-NPVLTVKTMGHQWYWSYEYTDY-----EDLCFDSYMIPTNELKPGDLRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CRABU (Cytochrome c oxidase subunit 2 OS=Cratogeomys bursarius GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21 Identity = 57/153 (37.25%), Postives = 81/153 (52.94%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLG QDA +P+M+ L ++ H +T +E +WT+ P++IL+ IA+PS +LY MDE+ DP +T+K +GHQWYW+YEY+DY + L+FDSYMI DL+ G+ RLL V Sbjct: 2 AYPMQLGLQDATSPIMEELTDFHDHTLMIVFLISTLVLYIISMML----------TTKLTHTSTMDAQEVETIWTVLPAVILVMIALPSLRILYMMDEIN-DPYLTVKTMGHQWYWSYEYTDY-----EDLMFDSYMIATSDLKPGEFRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_STRPU (Cytochrome c oxidase subunit 2 OS=Strongylocentrotus purpuratus GN=COII PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 3 Query: 399 GTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 G +E +WT+ P++IL+ IA+PS LLY MDEV DP +TIKA GHQWYW+YEY+D+N L FDSYM+P D+ G RLL V Sbjct: 58 GQELETIWTVIPALILILIALPSLQLLYLMDEVN-DPFLTIKAFGHQWYWSYEYTDFN-----DLEFDSYMVPTSDVSFGNPRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_PHOVI (Cytochrome c oxidase subunit 2 OS=Phoca vitulina GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21 Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P Q+G QDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTQELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_HALGR (Cytochrome c oxidase subunit 2 OS=Halichoerus grypus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21 Identity = 58/153 (37.91%), Postives = 83/153 (54.25%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P Q+G QDA +P+M+ L ++ H +T +E +WTI P+IIL+ IA+PS +LY MDE+ +P++T+K +GHQWYW+YEY+DY + L FDSYMIP +L+ G+LRLL V Sbjct: 2 AYPLQMGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLML----------TTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEIN-NPSLTVKTMGHQWYWSYEYTDY-----EDLNFDSYMIPTQELKPGELRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CRACA (Cytochrome c oxidase subunit 2 OS=Cratogeomys castanops GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.662e-21 Identity = 60/153 (39.22%), Postives = 80/153 (52.29%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTT-----IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 A P QLG QDA +P+M+ L ++ H T +E +WTI P+IIL+ IA+PS +LY MDE+ DP +T+K +GHQWYW+YEY+DY + L+FDSYMI DL+ G LRLL V Sbjct: 2 AYPMQLGLQDATSPIMEELTDFHDHTLMIVFLISTLVLYIISLML----------TTKLTHTNTMDAQEVETVWTILPAIILIMIALPSLRILYMMDEIN-DPYLTVKTMGHQWYWSYEYTDY-----EDLMFDSYMIATSDLKPGGLRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_GALSE (Cytochrome c oxidase subunit 2 OS=Galago senegalensis GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.089e-21 Identity = 46/84 (54.76%), Postives = 61/84 (72.62%), Query Frame = 3 Query: 408 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 +E +WTI P++IL+ IA+PS +LY MDE+ P++T+K +GHQWYW+YEY+DY+ L FDSYM P DLE G LRLL V Sbjct: 61 VETVWTILPAVILILIALPSLRILYMMDEIET-PSLTLKTVGHQWYWSYEYTDYD-----KLCFDSYMTPTPDLEPGDLRLLEV 138 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |