DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_ALBCO (Cytochrome c oxidase subunit 2 OS=Albinaria coerulea GN=COII PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.404e-17 Identity = 47/97 (48.45%), Postives = 63/97 (64.95%), Query Frame = 3 Query: 372 NPIPQRIVH-GTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 N + R +H +E LWTI P+ +L+++A+PS LLY +DE + I +KAIGHQWYW+YE N S+ FDSYMIPE+DL+ G RLL V Sbjct: 48 NTLSTRTMHEAQLLETLWTILPAFLLVWLALPSLRLLYLLDEQGSE-GIILKAIGHQWYWSYEMPSMNISN-----FDSYMIPEEDLKPGDYRLLEV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_EXERO (Cytochrome c oxidase subunit 2 OS=Exeristes roborator GN=COII PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.395e-17 Identity = 46/90 (51.11%), Postives = 62/90 (68.89%), Query Frame = 3 Query: 390 IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 I+ TIEI+WTI P IIL+++AIPS +LY DE+ +P +TIK+IGHQWYW+YEYSD+ + D F+S+MI + L RLL V Sbjct: 55 IMQNQTIEIIWTIIPMIILIYMAIPSLKILYLNDEIN-NPLMTIKSIGHQWYWSYEYSDFKNID-----FNSFMI--NSKNLNHFRLLDV 136
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_RHOSH (Cytochrome c oxidase subunit 2 OS=Rhodobacter sphaeroides GN=ctaC PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 4.516e-16 Identity = 43/132 (32.58%), Postives = 66/132 (50.00%), Query Frame = 3 Query: 219 EPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMI 614 +P GFQ +A+P+ + A+W FH K+N +P R H + +EI WTI P +IL+ I S +L++ E + + +T+K G+QWYW YEY D + + F+SYMI Sbjct: 37 QPGGTGFQPSASPVATQIHWLDGFILVIIAAITIFVTLLILYAVWRFHEKRNKVPARFTHNSPLEIAWTIVPIVILVAIGAFSLPVLFNQQE-IPEADVTVKVTGYQWYWGYEYPD------EEISFESYMI 161
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_APILI (Cytochrome c oxidase subunit 2 OS=Apis mellifera ligustica GN=COII PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 5.898e-16 Identity = 42/82 (51.22%), Postives = 58/82 (70.73%), Query Frame = 3 Query: 408 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 IEI+WTI P IIL+ I PS +LY +DE+V +P +IK+IGHQWYW+YEY ++N+ + FDSYM+ ++ L Q RLL Sbjct: 61 IEIIWTIIPIIILLIICFPSLKILYLIDEIV-NPFFSIKSIGHQWYWSYEYPEFNNIE-----FDSYMLNYNN--LNQFRLL 134
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_PARDE (Cytochrome c oxidase subunit 2 OS=Paracoccus denitrificans GN=ctaC PE=1 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.314e-15 Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 357 FHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDL 629 F+ + NP+P R H T IE++WT+ P +IL+ I S +L+ E+ DP + IKAIGHQWYW+YEY + + FD+ M+ ++ L Sbjct: 89 FNRRANPVPARFTHNTPIEVIWTLVPVLILVAIGAFSLPILFRSQEMPNDPDLVIKAIGHQWYWSYEYPN------DGVAFDALMLEKEAL 173
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_APIKO (Cytochrome c oxidase subunit 2 OS=Apis koschevnikovi GN=COII PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.716e-15 Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = 3 Query: 408 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 IEI+WTI P +IL+ I PS +LY +DE++ +P +IK+IGHQWYW+YEY ++N+ + FDSYM+ + L Q RLL Sbjct: 61 IEIIWTIVPIVILLIICFPSLKILYLIDEII-NPFFSIKSIGHQWYWSYEYPEFNNIE-----FDSYMLNYSN--LNQFRLL 134
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_DINSE (Cytochrome c oxidase subunit 2 OS=Dinodon semicarinatus GN=MT-CO2 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.823e-15 Identity = 43/84 (51.19%), Postives = 53/84 (63.10%), Query Frame = 3 Query: 408 IEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 +E WT+ P +IL+ A+PS LY M+EV +P +TIKA GHQWYW YEY SD + FDSYMI DL+ G RLL V Sbjct: 62 LEAAWTVAPIMILILTALPSVRSLYLMEEVF-NPYLTIKATGHQWYWNYEY-----SDGVKISFDSYMIQTKDLQNGSPRLLEV 139
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CAERE (Cytochrome c oxidase subunit 2 (Fragment) OS=Caenorhabditis remanei GN=cox-2 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.897e-14 Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 411 EILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 E+L +IFP+IIL+ +PS +LLY + +D +T+K GHQWYW+YEYSD L FDSYM D L LG+ RLL V Sbjct: 63 ELLCSIFPTIILLMQMVPSLSLLYYYGLMNLDSNLTVKVTGHQWYWSYEYSDI-----PGLEFDSYMKSLDQLNLGEPRLLEV 140
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CAEEL (Cytochrome c oxidase subunit 2 OS=Caenorhabditis elegans GN=cox-2 PE=3 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 1.897e-14 Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 411 EILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 E+L +IFP+IIL+ +PS +LLY + +D +T+K GHQWYW+YEYSD L FDSYM D L LG+ RLL V Sbjct: 64 ELLCSIFPTIILLMQMVPSLSLLYYYGLMNLDSNLTVKVTGHQWYWSYEYSDI-----PGLEFDSYMKSLDQLSLGEPRLLEV 141
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CAEBR (Cytochrome c oxidase subunit 2 OS=Caenorhabditis briggsae GN=cox-2 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.897e-14 Identity = 41/83 (49.40%), Postives = 53/83 (63.86%), Query Frame = 3 Query: 411 EILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 E+L +IFP+IIL+ +PS +LLY + +D +T+K GHQWYW+YEYSD L FDSYM D L LG+ RLL V Sbjct: 64 ELLCSIFPTIILLMQMVPSLSLLYYYGLMNLDSNLTVKVTGHQWYWSYEYSDI-----PGLEFDSYMKSLDQLNLGEPRLLEV 141 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |