DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_YEAST (Cytochrome c oxidase subunit 2 OS=Saccharomyces cerevisiae GN=COX2 PE=1 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 6.075e-29 Identity = 71/161 (44.10%), Postives = 93/161 (57.76%), Query Frame = 3 Query: 174 LLEWLFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQR-IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 LL T D P+ FQD+ATP +G + Y KNPI + I HG TIE++WTIFP++IL+ IA PSF LLY DE V+ PA+TIKAIG+QWYW YEYSD+ + +++ F+SY+IP++ LE GQLRLL Sbjct: 4 LLRLQLTTFIMNDVPTPYACYFQDSATPNQEGILELHDNIMFYLLVILGLVSWMLYTIV--MTYSKNPIAYKYIKHGQTIEVIWTIFPAVILLIIAFPSFILLYLCDE-VISPAMTIKAIGYQWYWKYEYSDFINDSGETVEFESYVIPDELLEEGQLRLL 161
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_LACTH (Cytochrome c oxidase subunit 2 OS=Lachancea thermotolerans GN=COX2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.768e-28 Identity = 70/149 (46.98%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 D P+ FQD+ATP +G Y KNPI + + HG TIEI+WTIFP++IL+ IA PSF LLY DEV+ PA+TIKAIG QWYW YEYSD+ + +++ F+SY+IPED LE GQLRLL Sbjct: 16 DVPTPYNTYFQDSATPNQEGILELHDNIMFYLLVILGLVSWLLFTITRT--YSKNPIAYKYIKHGQTIEIIWTIFPAVILLIIAFPSFILLYLCDEVI-SPAMTIKAIGLQWYWKYEYSDFINDSGETVEFESYVIPEDLLEDGQLRLL 161
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_SACKL (Cytochrome c oxidase subunit 2 OS=Saccharomyces kluyveri GN=COX2 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.309e-28 Identity = 69/149 (46.31%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 D P+ + FQD+ATP +G Y KNPI + + HG TIEI+WTIFP+++L+ IA PSF LLY DEV+ PA+TIKAIG QWYW YEYSD+ + +++ F+SY+IPED LE GQLRLL Sbjct: 16 DVPTPYGVYFQDSATPNQEGILELHDNIMFYLLVILGLVSWLLFTITRT--YSKNPIAYKYIKHGQTIEIIWTIFPAVVLLIIAFPSFILLYLCDEVI-SPAMTIKAIGLQWYWKYEYSDFINESGETVEFESYVIPEDLLEDGQLRLL 161
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_SCHPO (Cytochrome c oxidase subunit 2 OS=Schizosaccharomyces pombe GN=cox2 PE=3 SV=4) HSP 1 Score: 124.79 bits (312), Expect = 3.938e-28 Identity = 62/159 (38.99%), Postives = 92/159 (57.86%), Query Frame = 3 Query: 186 LFLTIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 LF DA W L FQD A+P G +A+ ++Y +PI + HG+ +E +WT+ P++IL+ +A+PSF LLY +DEV P++T+KAIG QW+WTYE +D+ +++ + + FDSYM+PE+DLE G LR L V Sbjct: 2 LFFNSILNDAPSSWALYFQDGASPSYLGVTHLNDYLMFYLTFIFIGVIYAICKAVIEYNYNSHPIAAKYTTHGSIVEFIWTLIPALILILVALPSFKLLYLLDEVQ-KPSMTVKAIGRQWFWTYELNDFVTNENEPVSFDSYMVPEEDLEEGSLRQLEV 159
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_PICCA (Cytochrome c oxidase subunit 2 OS=Pichia canadensis GN=COX2 PE=3 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 5.143e-28 Identity = 68/149 (45.64%), Postives = 89/149 (59.73%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQR-IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 D PW + FQD+ATP +G + KNP+P + +VHG TIEI+WTI P+++L+ IA PSF LLY DEV+ PA+TIKAIG QWYW YEYSD+ + +++ F+SY+IPED LE GQL LL Sbjct: 12 DVPTPWGVYFQDSATPNHEGIIELHDNIMFYLVLILCLVSWLLFSIVKDG--SKNPLPHKYLVHGQTIEIIWTILPALVLLVIAFPSFILLYLCDEVI-SPAMTIKAIGLQWYWKYEYSDFINDSGETIEFESYVIPEDLLEDGQLPLL 157
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_YARLI (Cytochrome c oxidase subunit 2 OS=Yarrowia lipolytica GN=COX2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.773e-28 Identity = 68/150 (45.33%), Postives = 87/150 (58.00%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D P+ L FQD+ATP G + +F + + + HGTT+EI+WTIFP +IL+FIA PSF LLY DEV+ DPA+TIKAI QWYWTYEYSD+ + + FDSY++P D LE GQLR+L V Sbjct: 7 DVPVPYGLYFQDSATPTFDGIIELHDIVMFYIVVTIVLVSYLLFVIIKNFS-NDHISYKYLTHGTTLEIVWTIFPVVILLFIAFPSFILLYLCDEVI-DPAMTIKAIASQWYWTYEYSDFIGETGEIVQFDSYIVPTDMLENGQLRMLDV 154
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_DEKBR (Cytochrome c oxidase subunit 2 OS=Dekkera bruxellensis GN=COX2 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.773e-28 Identity = 67/150 (44.67%), Postives = 87/150 (58.00%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D PW + FQD+ATP M+G L +++ P + + HG IEI+WT FP++IL+ IA PSF LLY DEV+ PA+TIKA+G QWYW YEYSD+ +++ F+SYMIPED LE GQLR L V Sbjct: 10 DVPTPWGMFFQDSATPNMEGMMELHNNVMFYLCMMLGFVSYMLYNMLTTYNHSVLPY-KYLYHGQFIEIVWTTFPAMILLIIAFPSFILLYICDEVIA-PAMTIKAMGLQWYWKYEYSDFIDDKGETIEFESYMIPEDLLEEGQLRQLDV 157
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_ASHGO (Cytochrome c oxidase subunit 2 OS=Ashbya gossypii GN=COX2 PE=3 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.954e-27 Identity = 68/154 (44.16%), Postives = 90/154 (58.44%), Query Frame = 3 Query: 195 TIAPCDAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQR-IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 TI D P+ + FQD+ TP +G + + YK NPI + I HG IEI+WTI P+IIL+ IA PSF LLY DE V+ PA+TIK IG QWYW YEYSD+ + + +++ ++SYMIPE+ LE GQLR+L Sbjct: 8 TIINNDVPTPYNMYFQDSTTPHQEGILELHDNIMFYMLTVLGLVSWMMIIII--KDYKNNPITYKYIKHGQMIEIIWTILPAIILLMIAFPSFILLYLCDE-VISPAMTIKVIGLQWYWKYEYSDFINDNGETIEYESYMIPEELLEEGQLRML 158
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_DEBHA (Cytochrome c oxidase subunit 2 OS=Debaryomyces hansenii GN=COX2 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.161e-26 Identity = 62/149 (41.61%), Postives = 87/149 (58.39%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 D PW + FQDAATP +G + YK N + + HG T+EI+WT+FP+++L+ +A PSF LLY DEV+ PA+T+K +G QWYW YEYSD+ S +++ ++SY++PED LE GQLRLL Sbjct: 5 DVPTPWGMRFQDAATPNAEGMHELYDHMMYYLALMLGLVSYMLYVMMKD--YKNNTFAYKYIKHGQTLEIMWTMFPAVMLLLMAFPSFMLLYLCDEVLT-PAMTVKVVGLQWYWKYEYSDFVSETGETVEYESYVMPEDMLEEGQLRLL 150
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_SACEX (Cytochrome c oxidase subunit 2 OS=Saccharomyces exiguus GN=COX2 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.686e-26 Identity = 64/149 (42.95%), Postives = 88/149 (59.06%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 D P+ FQD+ATP +G + Y +NP+ + + HG TIEI+W IFP++IL+ IA PSF LLY DEV+ PA+TIKAIG+QWYW YEY D+ + + +++ F+SY+IP+ LE GQLRLL Sbjct: 14 DVPTPYGFYFQDSATPNQEGILELHDNIMFYLVVILGLVSWMLFTIVRT--YSRNPMAYKYIKHGQTIEIIWKIFPAVILLTIAFPSFILLYLCDEVI-SPAMTIKAIGYQWYWKYEYFDFINDNGETIEFESYVIPDSLLEEGQLRLL 159 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |