DN135279
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_BREAN (Cytochrome c oxidase subunit 2 OS=Brettanomyces anomalus GN=COX2 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.686e-26 Identity = 64/151 (42.38%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQR-IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D PW + FQD+ATP M+G L H K+ +P + + HG +E++WT P+++L+ +A PSF LLY DEV+ PA+TIKA+G QWYW YEYSD+ +++ F+SYMIPED LE GQLR L V Sbjct: 9 DVPTPWGMFFQDSATPNMEGMMELHNNVMFYLCMMLGFVSYMLYNML---HNNKSVLPYKYLYHGQFMEMVWTTIPAMMLLMMAFPSFILLYMCDEVMA-PAMTIKAMGLQWYWKYEYSDFMDDKGETMEFESYMIPEDLLEEGQLRQLDV 155
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_EENNA (Cytochrome c oxidase subunit 2 OS=Eeniella nana GN=COX2 PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.072e-25 Identity = 63/151 (41.72%), Postives = 88/151 (58.28%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D PW + FQD+ATP M+G + Y K+ + + + HG +E++WT FP+++L+ +A PSF LLY DEV+ PA+TIKA+G QWYW YEYSD+ +++ F+SYMIPED LE GQLR+L V Sbjct: 12 DVPTPWAMYFQDSATPNMEGMMELHNNVLFYLCVMLGFVTYMLYNVMTV--YNKSAMAYKYMNHGQFMEMMWTTFPAMMLLMMAFPSFMLLYMCDEVMA-PAMTIKAMGLQWYWKYEYSDFMVEKGETMEFESYMIPEDLLEDGQLRMLDV 159
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CANAL (Cytochrome c oxidase subunit 2 OS=Candida albicans GN=COX2 PE=3 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.072e-25 Identity = 66/149 (44.30%), Postives = 84/149 (56.38%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 D PW + QD+ATP +G + YK N + V HG IEI+WTIFP++IL+ IA PSF LLY DEV+ PA+TIK IG QWYW YEYSD+ S +++ F+SY+IP+D LE G LRLL Sbjct: 5 DVPTPWGIRLQDSATPNAEGIHELYDHIMFYLCLILGLVSYILYVIIKD--YKDNRFAYKYVRHGQVIEIIWTIFPAVILLLIAFPSFILLYLCDEVLT-PAMTIKVIGLQWYWKYEYSDFVDSIGETIEFESYVIPDDMLEPGALRLL 150
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_BRENA (Cytochrome c oxidase subunit 2 OS=Brettanomyces naardenensis GN=COX2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.401e-25 Identity = 63/151 (41.72%), Postives = 87/151 (57.62%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIV-HGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D PW + FQD+ATP M+G Y K+ + + + HG IE++WT FP+++L+ +A PSF LLY DEV+ PA+TIKA+G QWYW YEYSD+ +++ F+SY+IPED LE GQLR+L V Sbjct: 13 DVPTPWAMYFQDSATPNMEGIMELHNNVVFYLIIMLCFVTYMLYNI--STVYNKSAVAYKYMNHGQFIEMVWTTFPAVMLLIMAFPSFMLLYICDEVMA-PAMTIKAMGLQWYWKYEYSDFMDEKGETIEFESYIIPEDLLEDGQLRMLDV 160
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_BRECS (Cytochrome c oxidase subunit 2 OS=Brettanomyces custersianus GN=COX2 PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 4.075e-25 Identity = 63/151 (41.72%), Postives = 86/151 (56.95%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVH-GTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 D PW + FQD+ATP M+G L Y K+ +P + ++ G +E++WT P+++L+ IA PSF LLY DEV+ PA+TIKA+G QWYW YEYSD+ ++ F+SYMIPED L+ GQLR L V Sbjct: 12 DVPTPWAMFFQDSATPNMEGMLELHNNVVFYLCMMLGFVTFMLYNMLTT--YNKSVMPYKYLNQGQFMEMMWTTLPAVMLLMIAFPSFILLYMCDEVMA-PAMTIKAMGLQWYWKYEYSDFMDEKGDTMEFESYMIPEDLLDEGQLRQLDV 159
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX1_ACACA (Cytochrome c oxidase subunit 1+2 OS=Acanthamoeba castellanii GN=COX1/2 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.022e-24 Identity = 74/219 (33.79%), Postives = 95/219 (43.38%), Query Frame = 3 Query: 210 DAAEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKK--NPIPQ---------------------------RIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYS-----------DYNSSD-------------------------------EQSLIFDSYMIPEDDLELGQLRLL 653 D W++GFQD TP+ G + F+Y N +P+ I HGTTIEI+WTI P+ IL+FIA+PSFALLY+MDE ++DP +T+K IGHQWYW+YEYS DY+S D E ++ FDSYMI E +L LG LRLL Sbjct: 559 DHTNSWKIGFQDPTTPIAYGIIKLHDHILFFLAVILFVVGYLLLSTYKKFYYGSLNNDLPESKRISLFDTLINTYKENLSFNVTNRTYNINHGTTIEIIWTILPAFILLFIAVPSFALLYAMDE-IIDPVLTVKVIGHQWYWSYEYSDYSVVYSNRMLDYDSIDRFAAMEMMYKGMGYLKDRSLLSYLYIPMVIPETTIKFDSYMIHEAELNLGDLRLL 776
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_DROYA (Cytochrome c oxidase subunit 2 OS=Drosophila yakuba GN=mt:CoII PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.641e-24 Identity = 59/143 (41.26%), Postives = 87/143 (60.84%), Query Frame = 3 Query: 231 LGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 LG QD+A+P+M+ V L + N + + ++HG IE++WTI P+IIL+FIA+PS LLY +DE + +P++T+K+IGHQWYW+YEYSD+N+ + FDSYMIP ++L + RLL V Sbjct: 7 LGLQDSASPLME-----QLIFFHDHALLILVMITVLVGYLMFMLFFNNYVNRFLLHGQLIEMIWTILPAIILLFIALPSLRLLYLLDE-INEPSVTLKSIGHQWYWSYEYSDFNNIE-----FDSYMIPTNELAIDGFRLLDV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_ANOQU (Cytochrome c oxidase subunit 2 OS=Anopheles quadrimaculatus GN=COXII PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 2.641e-24 Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 3 Query: 390 IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 ++HG TIEI+WT+ P+IILMFIA+PS LLY MDE+ P+IT+K++GHQWYW+YEYSD+ +L FDSYMIP ++LE RLL V Sbjct: 55 LLHGQTIEIIWTVLPAIILMFIALPSLRLLYLMDEINT-PSITLKSVGHQWYWSYEYSDF-----LNLEFDSYMIPTNELETNGFRLLDV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_SIMVI (Cytochrome c oxidase subunit 2 OS=Simulium vittatum GN=COII PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.450e-24 Identity = 52/90 (57.78%), Postives = 68/90 (75.56%), Query Frame = 3 Query: 390 IVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLLXV 659 ++HG TIEI+WTI P+I+LMFIA+PS +LY +DE + PAIT+K IGHQWYW+YEYSD+ +L FDSYM+P ++LE RLL V Sbjct: 55 LLHGQTIEIIWTILPAIVLMFIALPSLRILYLLDE-INSPAITLKTIGHQWYWSYEYSDF-----MNLEFDSYMVPTNELETNGFRLLDV 138
BLAST of DN135279 vs. ExPASy Swiss-Prot
Match: COX2_CROLA (Cytochrome c oxidase subunit 2 OS=Crossostoma lacustre GN=mt-co2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.450e-24 Identity = 62/146 (42.47%), Postives = 82/146 (56.16%), Query Frame = 3 Query: 216 AEPWQLGFQDAATPMMQGXXXXXXXXXXXXXXXXXXXXXXXVRALWHFHYKKNPIPQRIVHGTTIEILWTIFPSIILMFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLIFDSYMIPEDDLELGQLRLL 653 A P QLGFQDAA+P+M+ + + I+ IEI+WT+ P++IL+ IA+PS +LY MDE+ DP +TIKA+GHQWYW+YEY+DY ++L FDSYMIP DL GQ RLL Sbjct: 2 AHPTQLGFQDAASPVMEELLHFHDHALMIVFLISALVLYVIITTV-----STKLTNMYILDSQEIEIVWTVLPALILILIALPSLRILYLMDEIN-DPHLTIKAMGHQWYWSYEYTDY-----ENLSFDSYMIPTQDLTPGQFRLL 136 The following BLAST results are available for this feature:
BLAST of DN135279 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 302
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135279 ID=DN135279; Name=DN135279; organism=Citrus sinensis; type=EST; length=660bpback to top |