DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC2_HUMAN (Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Homo sapiens GN=TARSL2 PE=1 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.725e-80 Identity = 138/225 (61.33%), Postives = 172/225 (76.44%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RE+P+R ADFGVLHRNE SG L+GLTRVRRFQQDDAHIFC QI++E++G L+F+ Y FGF+++L LSTRPE +LG++ W +AE L +L +FG+PW++N GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RFNL Y ++D +RPV+IHRAILGSVERM AIL E+Y GKWPFWLSPRQ +V PV + YALQV + G+ D Sbjct: 504 RSWREMPIRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCTVEQIEEEIKGCLQFLQSVYSTFGFSFQLNLSTRPENFLGEIEMWNEAEKQLQNSLMDFGEPWKMNPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKRPVIIHRAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQVSSEFFEEGFMAD 728
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC2_MOUSE (Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Mus musculus GN=Tarsl2 PE=2 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 3.842e-80 Identity = 140/225 (62.22%), Postives = 170/225 (75.56%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RE+P+R ADFGVLHRNE SG L+GLTRVRRFQQDDAHIFC QI++E++G L F+ Y FGF+++L LSTRPE +LG++ W++AE L +L EFGKPW+IN GDGAFYGPKIDI + DA+ R QCAT+QLDFQLP RFNL Y ++D RPV+IHRAILGSVERM AIL E+Y GKWP WLSPRQ +V PV + YALQV + G+ D Sbjct: 492 RSWREMPVRFADFGVLHRNELSGTLSGLTRVRRFQQDDAHIFCMVEQIEEEIKGCLHFLQSVYSTFGFSFQLNLSTRPEHFLGEIEIWDEAERQLQNSLVEFGKPWKINPGDGAFYGPKIDIKIKDAIGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKNRPVIIHRAILGSVERMIAILSENYGGKWPLWLSPRQVMVIPVGPACENYALQVSKECFEEGFMAD 716
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_SCHPO (Threonyl-tRNA synthetase, cytoplasmic OS=Schizosaccharomyces pombe GN=ths1 PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 1.907e-79 Identity = 147/236 (62.29%), Postives = 175/236 (74.15%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRP-EKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEA----------KTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RSYR+LP R+ADFGVLHRNE SGAL+GLTRVRRFQQDDAHIFC Q++ E+ G +F+ Y FGFT+ L+LSTRP EKYLGDLATW+KAEA L AL+ G W++N GDGAFYGPKIDI+V DALKR+ QCAT+QLDFQLP+RF L + A A K RPVM+HRAILGS+ERM AIL EHY GKWPFW+SPRQ + PVS + YA +V + + A +VD Sbjct: 393 RSYRDLPWRVADFGVLHRNEFSGALSGLTRVRRFQQDDAHIFCTPDQVRSEIEGCFDFLKEVYGTFGFTFHLELSTRPEEKYLGDLATWDKAEAQLKAALDASGYKWELNAGDGAFYGPKIDITVFDALKRQHQCATIQLDFQLPERFQLEFHAPASAEEAKESGNNNKYTRPVMVHRAILGSLERMIAILTEHYAGKWPFWMSPRQVCIIPVSAAAYNYADKVHNILSEADIFVD 628
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC2_BOVIN (Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Bos taurus GN=TARSL2 PE=2 SV=1) HSP 1 Score: 289.271 bits (739), Expect = 1.367e-77 Identity = 135/212 (63.68%), Postives = 167/212 (78.77%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQ 661 RS+RE+P+RLADFGVLHRNE SGAL+GLT VRRFQQDDAHIFC Q+++E++G L+F+ Y FGF+++L LSTRPE +LG + W++AE L +L EFGKPW+IN G+GAFYGPKID+ + DAL R QCAT+QLDFQLP RFNL Y ++D + PV+IH+AILGSVERM AIL E+Y GKWPFWLSPRQ +V PV + YALQ Sbjct: 502 RSWREMPIRLADFGVLHRNEPSGALSGLTCVRRFQQDDAHIFCTVGQLEEEIKGCLQFLQSVYSTFGFSFQLNLSTRPENFLGKIELWDEAEKQLQNSLMEFGKPWKINPGEGAFYGPKIDLEIKDALGRYHQCATIQLDFQLPIRFNLTYVSKDGDDKKNPVIIHQAILGSVERMIAILSENYGGKWPFWLSPRQVMVIPVGPTCEKYALQ 713
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC2_DICDI (Probable threonyl-tRNA synthetase 2, cytoplasmic OS=Dictyostelium discoideum GN=thrS2 PE=3 SV=1) HSP 1 Score: 288.115 bits (736), Expect = 3.045e-77 Identity = 142/246 (57.72%), Postives = 172/246 (69.92%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEF-GKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSA------------------EDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 + RSY+ELP+R+ADFGVLHRNE G+L+GLTRVRRFQQDDAHIFC I++E++ L+F+ Y Y IF FT+ L+LSTRP+ YLG+L+ WEKAE +L++ L EF G W IN GDGAFYGPKIDI + DA + QCAT+QLDFQLP RFNL YS + RPVMIHRA+ GSVERM AIL+EH GKWPFWLSPRQ IV PVS +A +++ I AGY VD Sbjct: 383 RARSYKELPMRIADFGVLHRNETHGSLSGLTRVRRFQQDDAHIFCTPDMIREEIKQCLDFMKYVYTIFNFTFHLELSTRPDSYLGELSVWEKAETSLSQVLTEFCGDKWTINHGDGAFYGPKIDIHLKDANGKNHQCATIQLDFQLPIRFNLEYSGGLNNNNNNNNNNEEINDNNNNNSLNRPVMIHRALFGSVERMMAILMEHTAGKWPFWLSPRQCIVIPVSNKFNQFAQEIQSKINLAGYDVD 628
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTC_ENCCU (Probable threonyl-tRNA synthetase, cytoplasmic OS=Encephalitozoon cuniculi GN=ECU07_1570 PE=3 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 1.729e-72 Identity = 131/218 (60.09%), Postives = 168/218 (77.06%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYR 682 S+R+LPLRLADFGVLHRNE SG LTGLTRVRRFQQDDAHIFC + Q+K+E++G LEF+ + Y +FGF +EL LSTRPEKYLG + W++AE AL +A++E P++IN GDGAFYGPKIDI++ DAL R+ QCAT+QLDFQLP RF L Y + + + PV+IHRAILGS+ERM AI+LE + + PFW+SPRQ + V+ + Y +VR + R Sbjct: 343 SFRDLPLRLADFGVLHRNELSGTLTGLTRVRRFQQDDAHIFCTKDQVKEEIKGCLEFLSFVYGVFGFRFELVLSTRPEKYLGSVDEWDRAEKALADAMDESNMPFKINAGDGAFYGPKIDITLHDALGRRIQCATIQLDFQLPQRFELKY-RDSDGQCRTPVIIHRAILGSIERMIAIILESFGKRLPFWISPRQIAI--VNMGNPDYVGKVRSVLAR 557
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTM_HUMAN (Threonyl-tRNA synthetase, mitochondrial OS=Homo sapiens GN=TARS2 PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.708e-70 Identity = 127/225 (56.44%), Postives = 158/225 (70.22%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RELPLRLADFG LHR EASG L GLTR+R FQQDDAHIFC Q++ E++ L+F+ Y + GF++ L LSTRP +LGD W++AE L +AL EFG+PW +N GDGAFYGPKID+ + DAL R QC T+QLDFQLP RF+L Y + A ERPV+IHRA+LGSVER+ +L E GKWP WLSP Q +V PV + YA + + + AG D Sbjct: 421 RSWRELPLRLADFGALHRAEASGGLGGLTRLRCFQQDDAHIFCTTDQLEAEIQSCLDFLRSVYAVLGFSFRLALSTRPSGFLGDPCLWDQAEQVLKQALKEFGEPWDLNSGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGQAGA-LERPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPFQVVVIPVGSEQEEYAKEAQQSLRAAGLVSD 644
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTM_RAT (Threonyl-tRNA synthetase, mitochondrial OS=Rattus norvegicus GN=Tars2 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 6.149e-70 Identity = 129/225 (57.33%), Postives = 161/225 (71.56%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RELP+RLADFGVLHR EASG+L GLTR+ RFQQDDAHIFC SQ++ E+RG L+F+ Y + GF++ L LSTRP +LG+ W++AE L +AL EFG+PW +N GDGAFYGPKID+ + DAL R QC T+QLDFQLP RF+L Y A E PV+IHRA+LGSVER+ +L E G+WP WLSP Q +V PV + YA QV+ + AG D Sbjct: 426 RSWRELPVRLADFGVLHRAEASGSLGGLTRLWRFQQDDAHIFCAPSQLEAEIRGCLDFLRSVYSVLGFSFHLALSTRPPGFLGEPHLWDQAEKVLQQALEEFGEPWNLNPGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKGPAGA-PECPVLIHRAVLGSVERLLGVLAESCGGRWPLWLSPFQVVVIPVRTEQEDYARQVQQCLQAAGLVSD 649
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYTM_MOUSE (Threonyl-tRNA synthetase, mitochondrial OS=Mus musculus GN=Tars2 PE=2 SV=1) HSP 1 Score: 258.455 bits (659), Expect = 2.583e-68 Identity = 125/225 (55.56%), Postives = 158/225 (70.22%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 RS+RELP+RLADFG LHR EASG+L GLTR+ RFQQDDAHIFC Q++ E++G L+F+ Y + GF++ L LSTRP +LG+ W++AE L +AL +FG+PW +N GDGAFYGPKID+ + DAL R QC T+QLDFQLP RF+L Y E PV+IHRA+LGSVER+ +L E GKWP WLSP Q +V PV + YA QV+ + AG D Sbjct: 426 RSWRELPVRLADFGALHRAEASGSLGGLTRLWRFQQDDAHIFCAPHQLEAEIQGCLDFLRCVYSVLGFSFHLALSTRPPGFLGEPRLWDQAEQVLQQALEKFGEPWDLNPGDGAFYGPKIDVHLHDALGRPHQCGTIQLDFQLPLRFDLQYKG-PAGTPECPVLIHRAVLGSVERLLGVLAESCGGKWPLWLSPLQVVVIPVRTEQEEYARQVQQCLQAAGLVSD 649
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PELPD (Threonyl-tRNA synthetase OS=Pelobacter propionicus (strain DSM 2379) GN=thrS PE=3 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.187e-67 Identity = 123/225 (54.67%), Postives = 160/225 (71.11%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 +RSYR+LPLR + G +HR+E +G L GL RVR F QDDAHI C Q+ E++GVL+F+ IFGF YE++LSTRPEK +GD A WE A AL AL + G+ ++INEGDGAFYGPKIDI + DAL R++QCAT+Q DF LP+RF+L Y A D K +RPVM+HR +LG++ER +L+EHY G +P WLSP QA++ V+ PYA V +H+ AG V Sbjct: 346 LRSYRDLPLRYFELGTVHRHERAGVLHGLLRVRGFTQDDAHILCAPEQLDGEIKGVLKFVSDVMAIFGFEYEMELSTRPEKSIGDDAAWELATEALLSALKDTGRSFEINEGDGAFYGPKIDIKLKDALDRRWQCATIQCDFTLPERFDLQYVAADGEK-KRPVMVHRVVLGAIERFIGVLIEHYAGNFPLWLSPVQAMLVTVTDNHIPYAQGVLEHLREAGIRV 569 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |