DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_DESOH (Threonyl-tRNA synthetase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=thrS PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.502e-63 Identity = 115/220 (52.27%), Postives = 155/220 (70.45%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 SYR+LPLR+A+ G++HR+E SG L+GL RVR F QDDAHIF QI+ E+ GVL+ ++ Y FG + L+LSTRP K +G W KA A L AL+ +GK + +NEGDGAFYGPKID+ + DAL R +QC T+QLD LP+RF+L Y + ++ +RPVMIHR I GS+ER IL+EH+ GK+P WL+P QA++ P++ PYA +VR +AG Sbjct: 342 SYRDLPLRVAEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTPDQIEQEIFGVLKLVETIYSTFGLGFHLELSTRPAKSIGTDEQWVKATAGLRAALDAYGKGYAVNEGDGAFYGPKIDVHIKDALGRTWQCGTIQLDMSLPERFDLSY-IDAGSEKQRPVMIHRVIYGSIERFLGILIEHFAGKFPLWLAPTQAVLLPLNDDMIPYAREVRQEFEQAG 560
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CAMLR (Threonyl-tRNA synthetase OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=thrS PE=3 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.502e-63 Identity = 117/222 (52.70%), Postives = 156/222 (70.27%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 VRSYR+LPL+ ++GV+HR+E SG L GL RVR F QDDAHIFC SQIK++V +L F+D + FGF YE+++STRP K +GD W+ A AL +AL+E G + I+EG GAFYGPKIDI ++DALKRK+QC T+Q+DF LP RF L Y+ D K ++PVM+HRAILGS ER IL+EH G+ PF+++P Q + P+S YA ++ + G Sbjct: 312 VRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILSFVDTLMKAFGFDYEMEISTRPAKAIGDDEIWDIATNALKQALDEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFKLEYTDADNEK-KQPVMLHRAILGSFERFIGILIEHCAGELPFFIAPTQVAIVPISQNHHEYAKEIAKKLLELG 532
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CAMHC (Threonyl-tRNA synthetase OS=Campylobacter hominis (strain ATCC BAA-381 / LMG 19568 / NCTC 13146 / CH001A) GN=thrS PE=3 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.280e-63 Identity = 115/216 (53.24%), Postives = 159/216 (73.61%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVR 667 ++RSYR+LPL+ ++GV+HR+E SG + GL RVR F QDDAHIFC SQIK+ V +L+F+D + FGF+YE+++ST+PEK +GD WE A AL EAL+E G + I+EG GAFYGPKIDI ++DALKRK+QC T+Q+DF LP RF+LGY E+ + ++PVM+HRAILGS ER IL+EH G+ PF+++P + P++ YA +V+ Sbjct: 317 EIRSYRDLPLKFFEYGVVHRHEKSGVMHGLFRVREFTQDDAHIFCMPSQIKENVLEILDFVDKIMKNFGFSYEMEISTKPEKAIGDDKVWEIATNALKEALDENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPSRFDLGYIDENNER-KQPVMLHRAILGSFERFIGILIEHTAGELPFFIAPTGVSIIPINDAHLNYAKEVQ 531
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_THESQ (Threonyl-tRNA synthetase OS=Thermotoga sp. (strain RQ2) GN=thrS PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 9.508e-63 Identity = 117/223 (52.47%), Postives = 153/223 (68.61%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 SYR+LPLR +FG +HR E SG L GL RVR F QDDAHIFC QI++E+ GVL+ I+ Y FGFTY ++LST PE ++GD A WEKA AL AL G +++NEG+GAFYGPKID + D++ R++QCAT+QLDF +P++FN+ Y D K R VMIHRAI GS+ER F IL+EH+ G +P WL+P Q V P+S A ++ I + G+ V Sbjct: 345 SYRDLPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPGQIEEEILGVLDLINTIYSQFGFTYRVELSTMPEDHMGDEAIWEKATTALKNALERAGLSYKVNEGEGAFYGPKIDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDN-KEHRAVMIHRAIYGSLERFFGILIEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRV 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_THEMA (Threonyl-tRNA synthetase OS=Thermotoga maritima GN=thrS PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 9.508e-63 Identity = 118/223 (52.91%), Postives = 153/223 (68.61%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 SYR+LPLR +FG +HR E SG L GL RVR F QDDAHIFC QI++E+ GVL+ I+ Y FGFTY ++LST PE ++GD A WEKA AL AL G +++NEG+GAFYGPKID + D++ R++QCAT+QLDF +P++FN+ Y D K R VMIHRAI GS+ER F IL+EH+ G +P WL+P Q V P+S A +V I + G+ V Sbjct: 345 SYRDLPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLINTIYSQFGFTYRVELSTMPEDHMGDEAIWEKATTALKNALERAGLSYKVNEGEGAFYGPKIDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDN-KEHRAVMIHRAIYGSLERFFGILIEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKVARRISQEGFRV 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_DESAA (Threonyl-tRNA synthetase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=thrS PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 9.508e-63 Identity = 117/223 (52.47%), Postives = 152/223 (68.16%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 K SY +LP+R + G++HR+E SG L+GL RVR F QDDAHIF E I+DE+ GVL+ ++ Y FG + L+LSTRPEK +G WEKA L AL++ G+ ++INEGDGAFYGPKIDI + DAL R +QC T+QLD LP+RF+L Y D + RPVMIHR I GS+ER IL+EHY GK+P WLSP QA+V ++ YA +V+ + AG Sbjct: 339 KHHSYNDLPIRAGEIGLVHRHELSGVLSGLFRVRAFHQDDAHIFMTEEMIEDEILGVLQLVERMYSTFGLGFHLELSTRPEKTIGTDEQWEKATEGLRAALDKSGRDYKINEGDGAFYGPKIDIHIKDALGRTWQCGTIQLDMNLPERFDLTYVGADNQR-HRPVMIHRVIYGSIERFLGILIEHYAGKFPLWLSPCQAVVLAMNDDVAGYAKEVKARLEEAG 560
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CAMJJ (Threonyl-tRNA synthetase OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=thrS PE=3 SV=1) HSP 1 Score: 239.965 bits (611), Expect = 9.508e-63 Identity = 116/218 (53.21%), Postives = 156/218 (71.56%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHI 676 VRSYR+LPL+ ++GV+HR+E SG L GL RVR F QDDAHIFC SQIK++V +L F+D ++F F+YE+++ST+PEK +GD WE A AL EALNE G + I+EG GAFYGPKIDI ++DALKRK+QC T+Q+DF LP RF L Y+ D K ++PVM+HRAILGS ER IL EH G++PF+++P + P+ YA +++ + Sbjct: 311 VRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFTQDDAHIFCMPSQIKEQVLEILAFVDNLMKLFDFSYEMEISTKPEKAIGDDEIWEIATKALKEALNEQGLKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTVQVDFNLPSRFKLEYTDSDNEK-KQPVMLHRAILGSFERFIGILTEHCAGEFPFFIAPTAVGIVPIGEAHIAYAKEIQKEL 527
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_THEP1 (Threonyl-tRNA synthetase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=thrS PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.242e-62 Identity = 117/223 (52.47%), Postives = 153/223 (68.61%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYV 697 SYR+LPLR +FG +HR E SG L GL RVR F QDDAHIFC QI++E+ GVL+ I+ Y FGFTY ++LST PE ++GD A WEKA AL AL G +++NEG+GAFYGPKID + D++ R++QCAT+QLDF +P++FN+ Y D K R VMIHRAI GS+ER F IL+EH+ G +P WL+P Q V P+S A ++ I + G+ V Sbjct: 345 SYRDLPLRFFEFGRVHRYERSGVLHGLMRVRSFTQDDAHIFCTPDQIEEEILGVLDLINTIYGQFGFTYRVELSTMPEDHMGDEAIWEKATTALKNALERAGLSYKVNEGEGAFYGPKIDFHIRDSIGREWQCATIQLDFMMPEKFNVTYIGPDN-KEHRAVMIHRAIYGSLERFFGILIEHFAGAFPTWLAPIQVAVIPISEKHNDGAEKIAKRISQEGFRV 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_DESAH (Threonyl-tRNA synthetase OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=thrS PE=3 SV=1) HSP 1 Score: 239.58 bits (610), Expect = 1.242e-62 Identity = 116/224 (51.79%), Postives = 153/224 (68.30%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 SYR+LPLR + G++HR+E SGAL+GL RVR F QDDAHIF QI+ E+ GVLE ++ Y FG + L+LSTRP+K +G W +A L AL+++G+P+ INEGDGAFYGPKIDI + DAL R +QC T+QLD LP+RF+L Y D K RP+MIHR I GS+ER F IL+EH+ GK+P WL+P QA+V P++ +A V+ + G D Sbjct: 342 SYRDLPLRAGEIGLVHRHELSGALSGLFRVRAFHQDDAHIFMTPEQIESEILGVLELVERIYSRFGLGFHLELSTRPKKSIGSDEQWAEATNGLKNALDKYGQPYAINEGDGAFYGPKIDIHIKDALGRTWQCGTVQLDMALPERFDLTYKGADNEK-HRPIMIHRVIYGSIERFFGILVEHFAGKFPLWLAPVQAVVLPINDDLADHAQTVKKELESNGIRCD 564
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_NATTJ (Threonyl-tRNA synthetase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=thrS PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.622e-62 Identity = 112/224 (50.00%), Postives = 153/224 (68.30%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 SYR+ PLR+A+ G +HR+E SGAL GL R R F QDDAHIF SQ+++E+ V+ +D Y +FGF Y ++LST+PEK +G W++A AL L + G + +NEGDGAFYGPKID + DA+ R +QC+T+QLDF LP+RF+L Y ED K RPVMIHR I G++ER FA+L+EHY+GK+P WL+PRQA++ P++ Y + + G D Sbjct: 348 SYRDFPLRVAELGKVHRHELSGALHGLLRARSFTQDDAHIFMLPSQVEEELENVINLVDRFYSVFGFNYYVELSTKPEKAMGSDEIWDRAINALKSVLEKRGIKYIVNEGDGAFYGPKIDFQLEDAIGRSWQCSTIQLDFLLPERFDLTYIGEDGQK-HRPVMIHRVIYGAIERFFALLIEHYEGKFPLWLAPRQAVIIPIADRHMEYGKDITKQLESEGIRAD 570 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |