DN135274

Overview
NameDN135274
Unique NameDN135274
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length701
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_ACISJ (Threonyl-tRNA synthetase OS=Acidovorax sp. (strain JS42) GN=thrS PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.349e-51
Identity = 99/222 (44.59%), Postives = 140/222 (63.06%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYEL-KLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRA 685
            ++SYR+LPLR  +FG  HRNE +G L G+ RVR F QDD HIFC E  I  E       +   Y+ FGF   + K++TRPE  +G   +W+KAE AL E+L   G  ++I  GDGAFYGPKI+ ++ DA+ R++QC T+Q+DF +P+R +  Y  ED  +  RPVM+HRAI+GS+ER   IL+E + G  P WL+P Q  V  ++   Q Y  ++   + +A
Sbjct:  344 IKSYRDLPLRYGEFGQCHRNEPTGGLHGIMRVRGFTQDDGHIFCTEDHILAECTAYTALLQKVYKDFGFHNIIYKVATRPEARIGSDESWDKAEHALMESLRASGCEFEIAPGDGAFYGPKIEYTLKDAIGRQWQCGTMQVDFSMPERLDAEYVGEDGGR-HRPVMLHRAIVGSLERFIGILIEEHAGALPVWLAPVQVAVLNITDAQQDYCREIAAKLQKA 564          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_ACIAC (Threonyl-tRNA synthetase OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=thrS PE=3 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 8.349e-51
Identity = 99/222 (44.59%), Postives = 140/222 (63.06%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYEL-KLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRA 685
            V+SYR+LPLR  +FG  HRNE +G L G+ RVR F QDD HIFC E QI+ E       +   Y+ FGFT  + K++TRPEK +G   +W+KAE AL E+L   G  +QI  GDGAFYGPK++ ++ DA+ R +QC T+Q+D  +P+R    Y  ED  +  RP+++HRAI+GS+ER   IL+E + G  P WL+P Q  V  ++     Y  ++   + +A
Sbjct:  344 VKSYRDLPLRYGEFGQCHRNEPTGGLHGIMRVRAFTQDDGHIFCTEDQIQQECINFTALLQKVYKDFGFTDIIYKVATRPEKRIGSEESWDKAENALIESLKASGCDYQIAVGDGAFYGPKLEYTLRDAIGRHWQCGTIQVDPSMPERLGAEYVGED-GQRHRPIVLHRAIVGSLERFIGILIEQHAGALPVWLAPVQVAVLNITGAQDDYCREIAAKLQKA 564          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_VEREI (Threonyl-tRNA synthetase OS=Verminephrobacter eiseniae (strain EF01-2) GN=thrS PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 97/222 (43.69%), Postives = 142/222 (63.96%), Query Frame = 2
Query:   23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYEL-KLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRA 685
            ++SYR+LPLR  +FG  HRNE SG L G+ RVR F QDD HIFC   QI+ E+      +   YR FGFT  + KL+TRPEK++G   +W++AE AL + L   G  ++   G+GAFYGPK++ ++ DAL R++QC T+Q+D  +P+R +  +  ED A+  RP+M+HRAI+GS+ER   ILLE + G  P WL+P Q  +  ++     Y  ++   + +A
Sbjct:  344 IKSYRDLPLRFGEFGQCHRNEPSGGLHGIMRVRAFTQDDGHIFCTAQQIQSEILAFTALVQKVYRDFGFTDIIYKLATRPEKHIGTEESWDQAEHALAQGLRASGCEFEYLPGEGAFYGPKVEYTLKDALGRQWQCGTIQVDPNMPERLDAEFVGEDGAR-HRPIMLHRAIVGSLERFIGILLEQHAGALPAWLAPVQLALLNITEAQSDYCREIAAKMQKA 564          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_GEOSW (Threonyl-tRNA synthetase OS=Geobacillus sp. (strain WCH70) GN=thrS PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 109/233 (46.78%), Postives = 147/233 (63.09%), Query Frame = 2
Query:   20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTR----PEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQ-PYALQVRDHIYRAGYYVD 700
            K+ SYRELP+R+A+ G +HR E SGAL+GL RVR    +DAHIF R  QIKDE + V+  I   Y+ FG   Y  +LS R     EKY  D   WEKA+  L EA++E G  +   EG+ AFYGPK+D+ V  AL +    +T+QLDF LP+RF+L Y  ED  K  RPV+IHR ++ ++ER  A L+E YKG +P WL+P Q  V PVS  +   YA +V++ +   G+ V+
Sbjct:  348 KIHSYRELPIRIAELGTMHRYEMSGALSGLQRVRGMTLNDAHIFVRPDQIKDEFKRVVNLILEVYKDFGLDEYSFRLSYRDPHDKEKYYDDDEMWEKAQNMLREAMDELGLEYYEAEGEAAFYGPKLDVQVRTALGKDETLSTVQLDFLLPERFDLTYIGED-GKPHRPVVIHRGVVSTMERFVAFLIEEYKGAFPTWLAPVQVEVIPVSPAAHLDYAYKVKEALQSQGFRVE 579          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_FRATO (Threonyl-tRNA synthetase OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=thrS PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 96/216 (44.44%), Postives = 140/216 (64.81%), Query Frame = 2
Query:   20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQV 664
            K+ SYR+LP+R+A+FG++HRNE SG+L GL RVR F QDD HIFC   Q+++EV  +++     Y+ FGF  + +K++ RPE  +GD  TW+K+E  L  AL+     +++  G+GAFYGPKI+  + DA+ R +QC T+QLDF +P R    Y  +   + +  VM+HRAI+GS+ER   +L+EHY G  P WL+P Q  V  +S     Y  +V
Sbjct:  342 KLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETWDKSEQILKNALDANNVSYELFPGEGAFYGPKIEFHLKDAIGRSWQCGTIQLDFSMPQRLGATY-IDKNGEKQVSVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISNNQDDYCKEV 556          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_FRATH (Threonyl-tRNA synthetase OS=Francisella tularensis subsp. holarctica (strain LVS) GN=thrS PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 96/216 (44.44%), Postives = 140/216 (64.81%), Query Frame = 2
Query:   20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQV 664
            K+ SYR+LP+R+A+FG++HRNE SG+L GL RVR F QDD HIFC   Q+++EV  +++     Y+ FGF  + +K++ RPE  +GD  TW+K+E  L  AL+     +++  G+GAFYGPKI+  + DA+ R +QC T+QLDF +P R    Y  +   + +  VM+HRAI+GS+ER   +L+EHY G  P WL+P Q  V  +S     Y  +V
Sbjct:  342 KLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETWDKSEQILKNALDANNVSYELFPGEGAFYGPKIEFHLKDAIGRSWQCGTIQLDFSMPQRLGATY-IDKNGEKQVSVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISNNQDDYCKEV 556          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_FRATF (Threonyl-tRNA synthetase OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=thrS PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 96/216 (44.44%), Postives = 140/216 (64.81%), Query Frame = 2
Query:   20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQV 664
            K+ SYR+LP+R+A+FG++HRNE SG+L GL RVR F QDD HIFC   Q+++EV  +++     Y+ FGF  + +K++ RPE  +GD  TW+K+E  L  AL+     +++  G+GAFYGPKI+  + DA+ R +QC T+QLDF +P R    Y  +   + +  VM+HRAI+GS+ER   +L+EHY G  P WL+P Q  V  +S     Y  +V
Sbjct:  342 KLHSYRDLPIRMAEFGIVHRNEPSGSLHGLLRVRSFTQDDGHIFCTPEQVEEEVILMVQQCFEVYKDFGFNDFAVKIALRPENRIGDDETWDKSEQILKNALDANNVSYELFPGEGAFYGPKIEFHLKDAIGRSWQCGTIQLDFSMPQRLGATY-IDKNGEKQVSVMLHRAIVGSLERFIGMLIEHYAGNLPLWLAPVQVAVMGISNNQDDYCKEV 556          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_MYCUA (Threonyl-tRNA synthetase OS=Mycobacterium ulcerans (strain Agy99) GN=thrS PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.424e-50
Identity = 108/227 (47.58%), Postives = 142/227 (62.56%), Query Frame = 2
Query:   26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTR-PEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700
            RSYRELPLRL +FG ++R E SG + GLTRVR    DDAHIFC   Q++DE+R +L F+      +G T + L+LST+ P+K++G    WE+A   L E   E       + G  AFYGPKI + V DAL R +Q +T+QLDF  P+RF L Y+A D  + +RPVMIHRA+ GS+ER F IL EHY G +P WL+P QA+  PV+     Y  QV   +   G  V+
Sbjct:  385 RSYRELPLRLFEFGTVYRYEKSGVVHGLTRVRGLTMDDAHIFCTREQMRDELRSLLRFVLDLLSDYGLTDFYLELSTKDPDKFVGSDEVWEEATNVLAEVGAESSLELVPDPGGAAFYGPKISVQVKDALGRTWQMSTIQLDFNFPERFGLEYTAADGTR-QRPVMIHRALFGSIERFFGILTEHYAGAFPAWLAPVQAVGIPVADEHIAYLGQVAAQLKSHGVRVE 610          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CORJK (Threonyl-tRNA synthetase OS=Corynebacterium jeikeium (strain K411) GN=thrS PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.424e-50
Identity = 102/211 (48.34%), Postives = 137/211 (64.93%), Query Frame = 2
Query:   26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTR-PEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPY 652
            RSYRELPLRL +FG ++R E SG + GLTR R F QDDAHI+C E Q++ E+  VLEFI    R +G   + L+LST+ P K++G    WE++   L     + G     +    AFYGPKI +   DA+ R +Q +T+QLDF LP+RFNL Y+A D +K +RP+MIHRA+ GS+ER F +LLEHY G +P WL+P Q +  PV+     Y
Sbjct:  385 RSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEQELTTVLEFIISLLRDYGLDDFYLELSTKDPNKFVGSDEIWERSTEILERVATKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFNLEYTAPDGSK-QRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVVGIPVADEFNEY 594          
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CORDI (Threonyl-tRNA synthetase OS=Corynebacterium diphtheriae GN=thrS PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.424e-50
Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 2
Query:   26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTR-PEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVS 634
            RSYRELPLRL +FG ++R E SG + GLTR R F QDDAHI+C E Q++ E+  VL+FI    R +G   + L+LST+ P K++G    WEK+ + L     + G     +    AFYGPKI +   DA+ R +Q +T+QLDF LP+RFNL Y++ D +K +RP+MIHRA+ GS+ER F +LLEHY G +P WL+P Q I  PV+
Sbjct:  383 RSYRELPLRLFEFGTVYRYEKSGVIHGLTRARGFTQDDAHIYCTEDQLEQELTSVLDFIISLLRDYGLDDFYLELSTKDPNKFVGSDEIWEKSTSILQRVATKSGLELVPDPAGAAFYGPKISVQARDAIGRTWQMSTVQLDFNLPERFNLEYTSSDGSK-KRPIMIHRALFGSIERFFGVLLEHYAGAFPAWLAPHQVIGIPVA 586          
The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
SYT_ACISJ8.349e-5144.59Threonyl-tRNA synthetase OS=Acidovorax sp. (strain... [more]
SYT_ACIAC8.349e-5144.59Threonyl-tRNA synthetase OS=Acidovorax avenae subs... [more]
SYT_VEREI1.090e-5043.69Threonyl-tRNA synthetase OS=Verminephrobacter eise... [more]
SYT_GEOSW1.090e-5046.78Threonyl-tRNA synthetase OS=Geobacillus sp. (strai... [more]
SYT_FRATO1.090e-5044.44Threonyl-tRNA synthetase OS=Francisella tularensis... [more]
SYT_FRATH1.090e-5044.44Threonyl-tRNA synthetase OS=Francisella tularensis... [more]
SYT_FRATF1.090e-5044.44Threonyl-tRNA synthetase OS=Francisella tularensis... [more]
SYT_MYCUA1.424e-5047.58Threonyl-tRNA synthetase OS=Mycobacterium ulcerans... [more]
SYT_CORJK1.424e-5048.34Threonyl-tRNA synthetase OS=Corynebacterium jeikei... [more]
SYT_CORDI1.424e-5049.27Threonyl-tRNA synthetase OS=Corynebacterium diphth... [more]

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Properties
Property NameValue
Genbank descriptionwca08h07 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08h07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bp
TACGGCCGGGGTTTGNNNTAAGGTTCGTTCATACAGAGAACTACCTCTGC
GACTGGCTGATTTTGGGGTCTTGCATCGGAATGAAGCCAGTGGAGCACTC
ACTGGATTAACTCGTGTCAGGAGATTTCAGCAGGATGACGCTCATATTTT
CTGCAGGGAGTCCCAGATAAAAGACGAAGTAAGGGGTGTCCTAGAGTTCA
TTGATTATGCCTACAGAATATTCGGGTTCACATATGAGCTGAAGCTATCA
ACTAGGCCTGAAAAGTATCTTGGGGACTTGGCAACTTGGGAGAAAGCCGA
AGCTGCTCTTACAGAAGCATTGAATGAGTTTGGGAAGCCATGGCAGATAA
ATGAAGGGGATGGAGCATTTTATGGACCAAAGATTGATATCAGTGTATCT
GATGCATTGAAGAGGAAATTCCAGTGTGCTACTTTGCAGCTTGACTTTCA
GCTTCCTGATCGTTTCAACTTGGGTTACTCAGCGGAAGATGAAGCCAAGA
CAGAGAGACCTGTTATGATACACAGAGCGATATTGGGGTCTGTTGAACGT
ATGTTTGCTATACTGTTGGAACATTACAAGGGGAAGTGGCCTTTTTGGCT
CAGTCCACGTCAAGCAATTGTTTGCCCTGTGTCNNNGNAATCCCAACCAT
ATGCTTTACAGGTGCGGGATCATATTTATCGAGCCGGTTATTATGTTGAT
G
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