DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CLOTH (Threonyl-tRNA synthetase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=thrS PE=3 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62 Identity = 116/227 (51.10%), Postives = 151/227 (66.52%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 K+ SYR+LP RLA+ G++HR+E SG L GL RVR F QDDAHIF QI+ E+ GV+ ID Y++FGF Y ++LSTRPE +G WE+A AL AL + G ++INEGDGAFYGPKID + D++ R +QC T+QLDFQ+P+RF+L Y D K RPVMIHR + GS+ER AIL EHY G +P WLSP Q + P+ Y +V+ + G V+ Sbjct: 343 KLHSYRDLPQRLAELGLVHRHELSGVLHGLMRVRCFTQDDAHIFMTPDQIESEILGVISLIDDFYKVFGFKYHVELSTRPENSMGSDEDWERATNALKNALEKKGIDYKINEGDGAFYGPKIDFHLEDSIGRTWQCGTIQLDFQMPERFDLTYIGPDGEK-HRPVMIHRVVFGSIERFIAILTEHYAGAFPVWLSPVQVKILPILEKQHDYVAEVKKALEEKGVRVE 568
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_NITEU (Threonyl-tRNA synthetase OS=Nitrosomonas europaea GN=thrS PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.049e-62 Identity = 120/223 (53.81%), Postives = 152/223 (68.16%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYEL-KLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 +RSYR+LPLRLA+FG HRNEASGAL GL RVR F QDDAHIFC E QI EV ++ ++ Y FGF+ L KLSTRP K +G W+KAE AL ALN+ W++ G+GAFYGPKI+ ++ D+L RK+QC TLQLDF +P R GY AED + + PVM+HRAILGS+ER IL+EH+ G P WLSP Q I+ +S YA + D + ++G Sbjct: 344 LRSYRDLPLRLAEFGSCHRNEASGALHGLMRVRSFTQDDAHIFCTEDQILGEVTKFIDLLNQVYINFGFSETLIKLSTRPLKRVGTEDQWDKAETALATALNQKELNWEVQPGEGAFYGPKIEFTLKDSLGRKWQCGTLQLDFSMPARLGAGYIAEDNTR-KIPVMLHRAILGSMERFIGILIEHHAGALPLWLSPEQVIILNISRNQAEYAQLITDELKQSG 565
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_HELPG (Threonyl-tRNA synthetase OS=Helicobacter pylori (strain G27) GN=thrS PE=3 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 8.049e-62 Identity = 115/226 (50.88%), Postives = 159/226 (70.35%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 + SYR+LPLR ++GV+HR+E SG L GL RVR F QDDAHIFC QI+ EV +L+F + F F+YE++LSTRP K +GD WEKA +AL EAL E ++I+EG GAFYGPKIDI ++DALKRK+QC T+Q+D LP+RF L ++ E E+PVMIHRAILGS ER AIL EH+ G +PF+++P Q + P++ +AL++++ + + +V+ Sbjct: 321 LHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATSALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNE-RNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVE 545
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_HELP2 (Threonyl-tRNA synthetase OS=Helicobacter pylori (strain P12) GN=thrS PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.051e-61 Identity = 115/226 (50.88%), Postives = 159/226 (70.35%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 + SYR+LPLR ++GV+HR+E SG L GL RVR F QDDAHIFC QI+ EV +L+F + F F+YE++LSTRP K +GD WEKA +AL EAL E ++I+EG GAFYGPKIDI ++DALKRK+QC T+Q+D LP+RF L ++ E E+PVMIHRAILGS ER AIL EH+ G +PF+++P Q + P++ +AL++++ + + +V+ Sbjct: 321 LHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDEVWEKATSALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNE-RNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEVLKKRDIFVE 545
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_DESRM (Threonyl-tRNA synthetase OS=Desulfotomaculum reducens (strain MI-1) GN=thrS PE=3 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 1.051e-61 Identity = 114/215 (53.02%), Postives = 148/215 (68.84%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQV 664 ++ SYR+LPLR + G++HR+E SGAL GL RVR F QDDAHIF SQIKDE+ GV++ DY Y FG Y ++LSTRPEK +G WE A +L +AL +++NEGDGAFYGPKID ++D+L R +QC T+QLDFQ+P+RFNL Y ED K RPVMIHR + GS+ER IL EH+ G +P WL+P Q V P++ YA ++ Sbjct: 343 RMHSYRDLPLRWGELGLVHRHELSGALHGLMRVRCFTQDDAHIFMLPSQIKDEIIGVIDLFDYFYNTFGLNYHVELSTRPEKSMGSDEMWEVATNSLRDALEAKKMDYKVNEGDGAFYGPKIDFHLTDSLGRTWQCGTIQLDFQMPERFNLNYVGEDGQK-HRPVMIHRVVFGSIERFIGILTEHFAGAFPVWLAPVQVKVLPITDRHHEYAREL 556
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_THETN (Threonyl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=thrS PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.373e-61 Identity = 111/218 (50.92%), Postives = 148/218 (67.89%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHI 676 +RSYR+LPLRL + G++HR+E SG L GL RVR F QDDAH+F Q++DE+ GV+ +DY Y+IFGF Y ++LSTRPE +G WE A AL AL P+++NEG+GAFYGPKID + D++ R +QC T+QLDFQ+P+RF L Y D K RP+M+HR I GS+ER IL EH+ G +P WL+P Q V P+S YA +V + + Sbjct: 353 LRSYRDLPLRLCELGLVHRHELSGVLHGLMRVRSFTQDDAHLFMTPEQVEDEILGVINLVDYFYKIFGFEYHVELSTRPENSMGTDEEWELATNALISALKRANLPYKVNEGEGAFYGPKIDFHLKDSIGRTWQCGTIQLDFQMPERFELEYIGPDGEK-HRPIMLHRVIYGSIERFIGILTEHFAGAFPTWLAPVQVRVLPISEKHHEYARKVYERL 569
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_HELPS (Threonyl-tRNA synthetase OS=Helicobacter pylori (strain Shi470) GN=thrS PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.373e-61 Identity = 115/226 (50.88%), Postives = 158/226 (69.91%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 + SYR+LPLR ++GV+HR+E SG L GL RVR F QDDAHIFC QI+ EV +L+F + F F+YE++LSTRP K +GD WEKA AL EAL E ++I+EG GAFYGPKIDI ++DALKRK+QC T+Q+D LP+RF L ++ E E+PVMIHRAILGS ER AIL EH+ G +PF+++P Q + P++ +AL++++ + + +V+ Sbjct: 321 LHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEHN-HAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVE 545
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_FUSNN (Threonyl-tRNA synthetase OS=Fusobacterium nucleatum subsp. nucleatum GN=thrS PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.373e-61 Identity = 113/224 (50.45%), Postives = 156/224 (69.64%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAY-RIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 ++ SY++LP RLA+ G +HR+E SGAL GL RVR F QDD+HIF Q++DE+ GV+ ID Y ++FGF YE++LST+PEK +G W+ AEAAL AL++ G+ ++IN GDGAFYGPK+D + DA+ R +QC T+QLDF LP+RF++ Y ED K RPVM+HR I GS+ER IL+EHY G +P WL+P Q V ++ PYA ++ + + G Sbjct: 325 QLHSYKDLPARLAELGRVHRHEFSGALHGLMRVRSFTQDDSHIFMTPDQVQDEIIGVVNLIDKFYSKLFGFEYEIELSTKPEKAIGSQEIWDMAEAALAGALDKLGRKYKINPGDGAFYGPKLDFKIKDAIGRMWQCGTIQLDFNLPERFDVTYIGEDGEK-HRPVMLHRVIYGSIERFIGILIEHYAGAFPMWLAPVQVKVLTLNDECIPYAKEIMNKLEELG 547
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_DESAD (Threonyl-tRNA synthetase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=thrS PE=3 SV=1) HSP 1 Score: 236.113 bits (601), Expect = 1.373e-61 Identity = 115/223 (51.57%), Postives = 151/223 (67.71%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 ++RSYR+LP R + GV+HR+E SG L GL RVR F QDDAH+ CR Q++DE+ GV +F+ +FGF YE ++ST+PEK +G W++A AL AL E G + INEGDGAFYGPKIDI + DAL+R++QCAT+Q DF LP+RF+L Y ED + RPVM+HR ILGS+ER +LLEH G P WLSP QA + V+ +A +V + G Sbjct: 341 RLRSYRDLPQRYFEHGVVHRHEKSGVLHGLLRVRTFTQDDAHLICRPDQLRDEIIGVAKFVGDVMGLFGFEYEAEVSTKPEKAIGSDEDWDRATEALEGALKEMGMEYSINEGDGAFYGPKIDIIIKDALERRWQCATIQCDFTLPERFDLSYVGED-GERHRPVMLHRVILGSIERFIGVLLEHTGGALPAWLSPVQAKILTVTDSQNEFAQKVLQFLREKG 562
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_SYNPW (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain WH7803) GN=thrS PE=3 SV=1) HSP 1 Score: 235.728 bits (600), Expect = 1.793e-61 Identity = 116/224 (51.79%), Postives = 153/224 (68.30%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGF-TYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 K+RSYRELP+R A+ G ++R E G + GL RVR F QDDAH+FC QI DE+ +L+ + F F TYE+ LSTRPEK +GD A W+ A L EAL G ++I+EG GAFYGPKID+ + DA+ R +QC+T+QLDF LP+RF L Y A D +K +RP+MIHRAI GS+ER F I+ E+Y G +P WL+P Q + PV+ QPYA + D + +AG Sbjct: 312 KLRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPEQISDEILKILDLTERILSTFDFNTYEINLSTRPEKSIGDDAVWDLATKGLIEALERKGWAYKIDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFKLDYIAADGSK-QRPIMIHRAIFGSLERFFGIMTENYAGDYPLWLAPEQVRLLPVTDEVQPYAESLLDQLTQAG 534 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |