DN135274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_HELPY (Threonyl-tRNA synthetase OS=Helicobacter pylori GN=thrS PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.342e-61 Identity = 115/226 (50.88%), Postives = 158/226 (69.91%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 + SYR+LPLR ++GV+HR+E SG L GL RVR F QDDAHIFC QI+ EV +L+F + F F+YE++LSTRP K +GD WEKA AL EAL E ++I+EG GAFYGPKIDI ++DALKRK+QC T+Q+D LP+RF L ++ E E+PVMIHRAILGS ER AIL EH+ G +PF+++P Q + P++ +AL++++ + + +V+ Sbjct: 321 LHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDKVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDMNLPERFKLAFTNEYN-HAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEALKKRDIFVE 545
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_HELPH (Threonyl-tRNA synthetase OS=Helicobacter pylori (strain HPAG1) GN=thrS PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.342e-61 Identity = 114/226 (50.44%), Postives = 158/226 (69.91%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 + SYR+LPLR ++GV+HR+E SG L GL RVR F QDDAHIFC QI+ EV +L+F + F F+YE++LSTRP K +GD WEKA AL EAL E ++I+EG GAFYGPKIDI ++DAL+RK+QC T+Q+D LP+RF L ++ E E+PVMIHRAILGS ER AIL EH+ G +PF+++P Q + P++ +AL++++ + + +V+ Sbjct: 321 LHSYRDLPLRFYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCSFEQIQSEVSAILDFTHKIMQAFDFSYEMELSTRPAKSIGDDEVWEKATNALKEALKEHRIDYKIDEGGGAFYGPKIDIKITDALRRKWQCGTIQVDMNLPERFKLAFTNE-RNHAEQPVMIHRAILGSFERFIAILSEHFGGNFPFFVAPTQIALIPINEEHHVFALKLKEELKKRDIFVE 545
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_SYNS9 (Threonyl-tRNA synthetase OS=Synechococcus sp. (strain CC9902) GN=thrS PE=3 SV=1) HSP 1 Score: 234.958 bits (598), Expect = 3.059e-61 Identity = 117/224 (52.23%), Postives = 153/224 (68.30%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 K+RSYRELP+R A+ G ++R E G + GL RVR F QDDAH+FC QI DE+ +L+ + F F YE+ LSTRPEK +G A WE A LTEAL G ++I+EG GAFYGPKID+ + DA+ R +QC+T+QLDF LP+RF L Y A D +K ++P+MIHRAI GS+ER F I+ E+Y G +PFWL+P Q + PV+ QPYA QV + + AG Sbjct: 312 KLRSYRELPIRWAELGTVYRYERPGVMHGLMRVRGFTQDDAHVFCLPDQISDEILRILDLTERILSTFDFNHYEINLSTRPEKSIGSEAVWELATKGLTEALERKGWNFKIDEGGGAFYGPKIDLKIEDAIGRMWQCSTIQLDFNLPERFGLDYVAADGSK-QQPIMIHRAIFGSLERFFGIMTENYAGDFPFWLAPEQIRLLPVTDDVQPYAEQVLNQLKTAG 534
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_SULNB (Threonyl-tRNA synthetase OS=Sulfurovum sp. (strain NBC37-1) GN=thrS PE=3 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 3.995e-61 Identity = 112/221 (50.68%), Postives = 154/221 (69.68%), Query Frame = 2 Query: 26 RSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAG 688 +SYR+LP++ ++GV+HR+E SG L GL RVR F QDDAHIFC QI EV V+EF+D ++F F Y +++ST+PEK +GD WE A L +AL P+ I+EG GAFYGPKIDI ++DA+ RK+QC T+Q+DF LP+RF++ Y AED ++ +RPVM+HRAILGS ER IL EHY G++PF+++P Q I P+S YA ++ + G Sbjct: 314 KSYRDLPVKYYEYGVVHRHEKSGVLHGLLRVREFTQDDAHIFCAPEQIASEVLEVVEFVDSVMKLFEFEYTMEISTKPEKAIGDDEVWETATQGLKDALKGNDLPYTIDEGGGAFYGPKIDIKITDAIGRKWQCGTIQVDFNLPERFDVEYVAEDNSR-KRPVMLHRAILGSFERFIGILTEHYAGEFPFFIAPTQVIFVPISEGHAGYAYGLKKKLMLEG 533
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEPW (Threonyl-tRNA synthetase OS=Pseudomonas putida (strain W619) GN=thrS PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 5.217e-61 Identity = 115/224 (51.34%), Postives = 152/224 (67.86%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYR+LPLRLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q+K E ++ Y+ FGFT +KLSTRP K +G W++AE AL +ALNE G W+ G+GAFYGPKI+ ++ D L R +QC TLQ D LP+R + Y AED A+ +RPVM+HRAILGS ER +L+EHY G +P WL+P QA++ ++ +ALQV + +G+ Sbjct: 344 LKSYRDLPLRLAEFGACHRNEPSGALHGIMRVRGFVQDDAHIFCTEDQVKKEAADFIKLTLDVYKDFGFTDVAMKLSTRPAKRVGSEELWDRAEGALADALNESGLEWEYQPGEGAFYGPKIEFTLRDCLGRNWQCGTLQYDPNLPERLDASYIAEDNAR-KRPVMLHRAILGSFERFIGMLIEHYAGVFPAWLAPTQAVIMNITDKQADFALQVEKSLNGSGF 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_THISH (Threonyl-tRNA synthetase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=thrS PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.900e-61 Identity = 115/228 (50.44%), Postives = 155/228 (67.98%), Query Frame = 2 Query: 20 KVRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 ++ SYR+LPLR A+ G ++R E SGAL GL RVR F QDDAHIFCRE QI+ E+ +L+ + FGF +++ LSTRP+K +G WE A AAL AL + G + ++EG GAFYGPKIDI + DA+ R++QC+T+QLDF LP+RF + Y AED ++ RP+MIHRA+LGSVER F +L+EHY G +P WL+P Q V ++ YA +V D + G D Sbjct: 345 RLHSYRDLPLRWAEMGTVYRREMSGALHGLMRVRGFTQDDAHIFCREDQIEAEILRILDLTLEVLQAFGFDDFDVNLSTRPDKAVGSDQIWEHATAALKAALEKKGLDYSVDEGGGAFYGPKIDIKIRDAIGREWQCSTVQLDFNLPERFEMEYVAEDNSR-RRPIMIHRALLGSVERFFGVLIEHYAGSFPLWLAPVQVQVLTITDRQDDYAREVADRLRNRGIRAD 571
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_PSEPF (Threonyl-tRNA synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=thrS PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.900e-61 Identity = 115/224 (51.34%), Postives = 153/224 (68.30%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGY 691 ++SYRELP+RLA+FG HRNE SGAL G+ RVR F QDDAHIFC E Q++ E ++ YR FGFT E+KLSTRPEK +G W++AEAAL AL+ G P+ + G+GAFYGPKI+ S+ D L R +QC TLQLDF LP R Y +ED ++ + PVM+HRAILGS ER IL+EHY+G +P WL+P QA++ ++ + +QV + +G+ Sbjct: 344 LKSYRELPMRLAEFGACHRNEPSGALHGIMRVRAFTQDDAHIFCTEEQMQAESAAFIKLTMDVYRDFGFTDVEMKLSTRPEKRVGSDELWDRAEAALAAALDSAGLPYDLQPGEGAFYGPKIEFSLKDCLGRVWQCGTLQLDFNLPVRLGAEYVSEDNSR-KHPVMLHRAILGSFERFVGILIEHYEGAFPAWLAPTQAVIMNITDKQADFVVQVEKTLNESGF 566
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_MAGSM (Threonyl-tRNA synthetase OS=Magnetococcus sp. (strain MC-1) GN=thrS PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.900e-61 Identity = 113/225 (50.22%), Postives = 158/225 (70.22%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFT-YELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 SYRELP R + G ++R E SGAL GL RVR F QDDAHIFC E QI++E++ +L+ R +GF+ +E+ LSTRPEK +G A W+KA AL A+ + ++EG GAFYGPKID+ ++D++ RK+QC+T+QLDF LP+RF++GY ED ++ RP+MIHRA++GS+ER F IL+EHY G +P WL+P QA+VC ++ YA V + +AG V+ Sbjct: 349 SYRELPFRWGELGTVYRYEMSGALHGLFRVRGFTQDDAHIFCTEQQIEEEIQRILDLTLDILRTYGFSDFEINLSTRPEKSVGSAAIWDKATEALRRAIVSRDLSYVVDEGGGAFYGPKIDVKITDSIGRKWQCSTVQLDFNLPERFDMGYIGED-GESHRPIMIHRALMGSLERFFGILVEHYAGWFPMWLAPVQAVVCSITDAQHAYAETVLAALKKAGLRVE 572
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_DESDG (Threonyl-tRNA synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=thrS PE=3 SV=1) HSP 1 Score: 233.417 bits (594), Expect = 8.900e-61 Identity = 113/224 (50.45%), Postives = 153/224 (68.30%), Query Frame = 2 Query: 29 SYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQVRDHIYRAGYYVD 700 SYR+LP+RL + GV+HR+E SG L GL RVR+F QDDAHI C Q++ E+ GVL F+ +FGF Y +++STRPEK +G W++A +AL +AL G P++INEGDGAFYGPKID+ + D L R++QCAT+Q DF LPDRF+L Y +D + RPVM+HR ILGSVER +L EH+ G +P WL+P QA + V+ +A + R + G V+ Sbjct: 346 SYRDLPVRLFELGVVHRHEKSGVLHGLLRVRQFTQDDAHIICTPDQLESEIVGVLNFVRDVMGVFGFEYSMEVSTRPEKSIGSDEDWDRATSALVKALEGQGLPYEINEGDGAFYGPKIDVKLRDCLGREWQCATVQCDFTLPDRFDLVYIGQD-GERHRPVMVHRVILGSVERFIGVLTEHFAGAFPTWLAPVQARLLTVTDAQNEFAEEARAALMAQGIRVE 568
BLAST of DN135274 vs. ExPASy Swiss-Prot
Match: SYT_CAMC1 (Threonyl-tRNA synthetase OS=Campylobacter concisus (strain 13826) GN=thrS PE=3 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.162e-60 Identity = 111/214 (51.87%), Postives = 153/214 (71.50%), Query Frame = 2 Query: 23 VRSYRELPLRLADFGVLHRNEASGALTGLTRVRRFQQDDAHIFCRESQIKDEVRGVLEFIDYAYRIFGFTYELKLSTRPEKYLGDLATWEKAEAALTEALNEFGKPWQINEGDGAFYGPKIDISVSDALKRKFQCATLQLDFQLPDRFNLGYSAEDEAKTERPVMIHRAILGSVERMFAILLEHYKGKWPFWLSPRQAIVCPVSXXSQPYALQV 664 +RSYR+LPL+ ++GV+HR+E SG L GL RVR F QDD+HIFC SQIK+ + +L+F FGF YE+++ST+P K +G W+ A AL EAL+E G + I+EG GAFYGPKIDI ++DALKRK+QC T+Q+DF LP+RF+LGY + + +RPVM+HRA+LGS ER ILLEH G+ PF+++P Q ++ P+S YA ++ Sbjct: 315 IRSYRDLPLKFFEYGVVHRHEKSGVLHGLFRVREFAQDDSHIFCMPSQIKENILEILKFAGTIMENFGFHYEMEISTKPAKAIGGDEIWDTATKALKEALDENGFKYGIDEGGGAFYGPKIDIKITDALKRKWQCGTIQVDFNLPERFDLGY-IDANNERQRPVMLHRALLGSFERFIGILLEHTAGELPFFIAPTQVVIVPISDAHLDYAKEI 527 The following BLAST results are available for this feature:
BLAST of DN135274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DN135274 ID=DN135274; Name=DN135274; organism=Citrus sinensis; type=EST; length=701bpback to top |