DN135236

Overview
NameDN135236
Unique NameDN135236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13457 contig Csv1_Contig13457:1053..1759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: C71BG_ARATH (Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=CYP71B16 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 47/184 (25.54%), Postives = 85/184 (46.20%), Query Frame = 2
Query:  113 ILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR--TIPDAIYAHGHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 658
            I +V+L +  +  K     LPP P  +PVIGNL ++G+ PH+S  +LA+  G +M L FG V   V SS   A+E+L+  D   C R   +   + + G  +  + + P    WR  RK      F  +++    ++  ++   L+  + E+      + + ++ F    +++    F     D
Sbjct:   11 ITLVSLIFVVKKIKHSKWDLPPSPPTFPVIGNLHQVGELPHRSFQRLAERTGHVMLLHFGFVPVTVISSREAAEEVLRTHDLKCCTRPKLVGSRLISRGFKD--ISFTPYGEEWRERRKFLVRELFCFKKVQYFGYIVEEECNLLVKKLTESAVGRPPVDLSKSLFWLAASILFRIAFGQSFHD 192          
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 45/157 (28.66%), Postives = 80/157 (50.96%), Query Frame = 2
Query:  170 LPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQ--ENCRAGTAIHIGQAAFDTTLNLI 625
            LPP P   PVIGNL +L    H+SL  L+  +GP+M L FG+   ++ SSA +A +IL+  D    NR    + D I   G     + + P    W+  + IC  +  S++ + + + +R  +I+ ++  V+   +C   + +++ Q     T ++I
Sbjct:   33 LPPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGR---DVAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQLFMTLTNDII 186          
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.198e-12
Identity = 41/157 (26.11%), Postives = 77/157 (49.04%), Query Frame = 2
Query:  170 LPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIF 640
            LPP P   PVIGNL +L   PH+SL  L+  +GP+M L FG+V  +V SS+ +A ++++  D    NR     I    +    + + P    WR  + +C  H  + + + +   +R ++   ++  V++     + +++ +     T ++ S   F
Sbjct:   32 LPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANRPRLKVIETILNGGREVVFSPYGDYWRQIKTVCVVHLLNKKMVQSFAKVREEERSVMMEKVEKASSDSSPLNLSKLLITLTSDVASRVSF 188          
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 45/181 (24.86%), Postives = 93/181 (51.38%), Query Frame = 2
Query:   98 LLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNR---TIPDAIYAHGHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQE-NCRAG-TAIHIGQAAFDTTLNLI 625
            L  + +L + L    +   + +  LPP P   PVIGNL +L    H+SL  L+  +GP+M L FG+   ++ SSA +A ++++  D    NR    + D I + G     + + P    WR  + IC  +  +++ + + + +R ++I+ ++  +++ +C +  + +++ Q     T ++I
Sbjct:    8 LCLTTLLALLLKSILKRTATKNFNLPPSPWRLPVIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGR---DVAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKASCSSSPSPVNLSQILMTLTNDII 185          
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: C519B_DICDI (Probable cytochrome P450 519B1 OS=Dictyostelium discoideum GN=cyp519b1 PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 51/194 (26.29%), Postives = 97/194 (50.00%), Query Frame = 2
Query:   71 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDL 652
            M++++ + + +  WI+      F R  +  S   PP P   P+IG+L +L   PH+SL +LAK++G + SL  G   TVV +  +  K++   Q  +F NR  P +I    + + G+ +      W+  RK+ +S A +  ++    +L  K+ ++L+  + E        H  +     +LN+I + +FS ++
Sbjct:    1 MNLINLILYFILFWIVFD----FIRKNRRISFNDPPSPWALPIIGHLHKLSLNPHRSLTELAKVYGGVYSLHIGDSKTVVITDVSAFKDVTIKQFKNFANRPQPKSIRVITNFK-GLAFADY-DQWQKTRKLVSS-ALTKTKIKTFNNLIEKQTENLIESMNEFSNKNELFHPRKYLTKYSLNIILSMLFSKEI 187          
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: C82A2_SOYBN (Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 55/170 (32.35%), Postives = 84/170 (49.41%), Query Frame = 2
Query:  116 LVVALNYFSRG--FKSGSRRLPPGPTPYPVIGNL-LELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAH--GHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFD 607
            L++ L  F RG  +KSG    P     +P+IG+L L LG K PHK+L  LA  +GPI S+K G    VV S+  MAKE     D +    ++PD I A+   ++   +   P    WR  RKI  S   S  +++   H+R  ++Q  +  +  + R+   +  G A  +
Sbjct:   17 LILLLYLFLRGGSWKSGEEGPPTVAGAWPIIGHLPLLLGSKTPHKTLGDLADKYGPIFSIKIGAKNAVVVSNWEMAKECYTTNDIAV--SSLPDLISANLLCYNRSMIVVAPYGPYWRQLRKILMSEFLSPSRVEQLHHVRVSEVQSSITELFRDWRSNKNVQSGFATVE 184          
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.669e-12
Identity = 46/166 (27.71%), Postives = 83/166 (50.00%), Query Frame = 2
Query:  164 RRLPPGPTPYPVIGNL-LELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGTAIHIGQAAFDTTLNLISNTIFSIDLAD 658
            + LPPGP   P++G+L L  G  P  ++A +AK +GP+  ++ G+V +VV SS    KE ++  D +  +R          +    + + P +  WR  RKIC S   S+R + +   +R+ ++  LL ++Q +  AG  + + +     T ++I    F   + D
Sbjct:   32 QNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADRFESIGTRIMWYDNDDIIFSPYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIIND 195          
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12
Identity = 52/173 (30.06%), Postives = 86/173 (49.71%), Query Frame = 2
Query:   71 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT 577
            MD++     LL S++ ++     S+  +    +LPPGP P PV GN L++GD   H++L  LAK  G I+ L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR  R+I     F+++ +   ++   ++   ++  V++N  A T
Sbjct:    1 MDLLLLEKTLLGSFVAILVAILVSK-LRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDILLLRMGQRNLVVVSSPELSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPGAAT 169          
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12
Identity = 53/173 (30.64%), Postives = 85/173 (49.13%), Query Frame = 2
Query:   71 MDMVSCVPWLLFSWILVVALNYFSRGFKSGSRRLPPGPTPYPVIGNLLELGDK-PHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRT---IPDAIYAHGHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQENCRAGT 577
            MD++     LL S++ V+     S+  +    +LPPGP P PV GN L++GD   H++L  LAK  G I  L+ GQ   VV SS  ++KE+L  Q   F +RT   + D     G     M +      WR  R+I     F+++ +   ++   ++   ++  V++N  A T
Sbjct:    1 MDLLLLEKTLLGSFVAVLVAILVSK-LRGKRFKLPPGPLPVPVFGNWLQVGDDLNHRNLTDLAKKFGDIFLLRMGQRNLVVVSSPDLSKEVLHTQGVEFGSRTRNVVFDIFTGKGQ---DMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGWEEEAAQVVEDVKKNPEAAT 169          
BLAST of DN135236 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.486e-12
Identity = 37/129 (28.68%), Postives = 67/129 (51.94%), Query Frame = 2
Query:  176 PGPTPYPVIGNLLELGDKPHKSLAKLAKIHGPIMSLKFGQVTTVVFSSAAMAKEILQNQDTSFCNRTIPDAIYAHGHHEFGMPWLPVATLWRNFRKICNSHAFSSRQLDANQHLRRKKIQDLLAYVQEN 562
            P P   P+IGNL +L   PH+SL  L+  +GP+M L FG V  +V S+A  A+++L+  D  F +R          +    M   P    WR  + +   H  S++ + + Q +R+++I  ++  ++++
Sbjct:   31 PSPPRLPLIGNLHQLSQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASRPRSKIFEKLLYKSRNMASAPYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKS 159          
The following BLAST results are available for this feature:
BLAST of DN135236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 112
Match NameE-valueIdentityDescription
C71BG_ARATH1.198e-1225.54Cytochrome P450 71B16 OS=Arabidopsis thaliana GN=C... [more]
C71AJ_ARATH1.198e-1228.66Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71AF_ARATH1.198e-1226.11Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH2.044e-1224.86Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C519B_DICDI2.044e-1226.29Probable cytochrome P450 519B1 OS=Dictyostelium di... [more]
C82A2_SOYBN2.669e-1232.35Cytochrome P450 82A2 OS=Glycine max GN=CYP82A2 PE=... [more]
C7D95_MENGR2.669e-1227.71Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
TCMO_POPTM3.486e-1230.06Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI3.486e-1230.64Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
C71AN_ARATH3.486e-1228.68Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionwca08c09 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08c09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135236 ID=DN135236; Name=DN135236; organism=Citrus sinensis; type=EST; length=707bp
GGCCGGGGAGGGAATGCCACCTGAATTTGGTGTTTACAAGAGCTTCAAAC
AAAAGAGAGCCAGATTAAAGATGGATATGGTAAGCTGCGTACCATGGCTT
CTATTCTCGTGGATTTTGGTCGTCGCTTTAAATTATTTTTCAAGAGGATT
CAAATCTGGATCCAGAAGGCTTCCACCGGGACCGACGCCTTATCCGGTGA
TCGGAAACCTCCTGGAACTCGGCGACAAACCTCACAAGTCACTTGCTAAA
CTTGCCAAGATTCATGGCCCCATAATGAGTCTAAAATTTGGCCAGGTGAC
CACAGTTGTCTTTTCTTCTGCAGCCATGGCCAAAGAAATCCTTCAAAATC
AAGACACATCTTTCTGTAACCGAACGATCCCAGACGCAATCTACGCCCAC
GGCCATCATGAATTCGGGATGCCCTGGCTGCCTGTGGCGACACTGTGGAG
AAATTTTCGAAAAATATGCAACTCACATGCTTTCTCTAGTCGCCAACTCG
ATGCCAATCAGCACCTTCGGCGTAAGAAAATCCAAGATCTTCTAGCTTAT
GTCCAAGAAAATTGCCGTGCAGGTACAGCAATACATATTGGCCAAGCTGC
TTTTGACACTACGCTTAATTTGATATCCAACACAATTTTTTCTATTGACT
TGGCTGATCCCACATCNNNAACTGCGCGAGAGTTTAAGCAAATAAATTGG
GGTATGA
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