DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_HUMAN (S-adenosylmethionine synthetase isoform type-1 OS=Homo sapiens GN=MAT1A PE=1 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.030e-20
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L+QDP +KVACET  KT MV++ GEIT+ A VDY++VVRDT + IG+  +  G D   C VLV +E+QSP+IAQ VH  L +  E++G
Sbjct:   43 DAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVG 131          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_RAT (S-adenosylmethionine synthetase isoform type-1 OS=Rattus norvegicus GN=Mat1a PE=1 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 3.958e-20
Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L+QDP +KVACET  KT MV++ GEIT+ A +DY++VVRDT + IG+  +  G D   C VLV +E+QSP+IAQ VH  L +  E++G
Sbjct:   44 DAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMIDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVG 132          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_MOUSE (S-adenosylmethionine synthetase isoform type-1 OS=Mus musculus GN=Mat1a PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.958e-20
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L+QDP +KVACET  KT MV++ GEIT+ A VDY++VVRDT + IG+  +  G D   C VLV +E+QSP+IAQ VH  L +  E++G
Sbjct:   44 DAHLKQDPNAKVACETVCKTGMVLLCGEITSVAMVDYQRVVRDTIKHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVG 132          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_VIBSL (S-adenosylmethionine synthetase OS=Vibrio splendidus (strain LGP32) GN=metK PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.817e-20
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA +EQDP+++VACET  KT MVMV GE+TT A VD +++ R+T R IG+V +D+G DAD C VL  I KQSP+I Q V
Sbjct:   29 DAIIEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDADSCAVLNTIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 8.817e-20
Identity = 50/91 (54.95%), Postives = 62/91 (68.13%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L+QDP +KVACET  KT MVM+ GEIT+KA VDY+ +VR     IGF  + +G D   C VLV +E+QSPEIA  VH N  K  E++G
Sbjct:   30 DAHLKQDPNAKVACETVTKTGMVMLCGEITSKAVVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVN--KDGEDVG 118          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK1_BOVIN (S-adenosylmethionine synthetase isoform type-1 OS=Bos taurus GN=MAT1A PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.151e-19
Identity = 48/91 (52.75%), Postives = 65/91 (71.43%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L+QDP +KVACET  KT MV++ GEIT+ A VDY++VVR+T + IG+  +  G D   C VLV +E+QSP+IAQ VH  L +  E++G
Sbjct:   44 DAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRETIQHIGYDDSAKGFDFKTCNVLVALEQQSPDIAQCVH--LDRNEEDVG 132          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PROMH (S-adenosylmethionine synthetase OS=Proteus mirabilis (strain HI4320) GN=metK PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.504e-19
Identity = 47/79 (59.49%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GEITTKA VD +++ R T R IG+ S+D+G DA+ C V+  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEITTKAWVDIEEITRKTVREIGYTSSDMGFDANSCAVISAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PHOPR (S-adenosylmethionine synthetase OS=Photobacterium profundum GN=metK PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.504e-19
Identity = 49/91 (53.85%), Postives = 65/91 (71.43%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA LEQDP+++VACET  KT MVMV GEITT A VD +++ R+T R IG+V++++G DA+ C VL  I KQSP+I Q V     + P E+G
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRETIREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGVD---REDPRELG 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_VIBHB (S-adenosylmethionine synthetase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=metK PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GE+TT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_VIBFM (S-adenosylmethionine synthetase OS=Vibrio fischeri (strain MJ11) GN=metK PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GE+TT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGV 107          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK1_HUMAN3.030e-2053.85S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_RAT3.958e-2052.75S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK1_MOUSE3.958e-2053.85S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_VIBSL8.817e-2058.23S-adenosylmethionine synthetase OS=Vibrio splendid... [more]
METK1_CAEEL8.817e-2054.95Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]
METK1_BOVIN1.151e-1952.75S-adenosylmethionine synthetase isoform type-1 OS=... [more]
METK_PROMH1.504e-1959.49S-adenosylmethionine synthetase OS=Proteus mirabil... [more]
METK_PHOPR1.504e-1953.85S-adenosylmethionine synthetase OS=Photobacterium ... [more]
METK_VIBHB1.964e-1958.23S-adenosylmethionine synthetase OS=Vibrio harveyi ... [more]
METK_VIBFM1.964e-1958.23S-adenosylmethionine synthetase OS=Vibrio fischeri... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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