DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_VIBF1 (S-adenosylmethionine synthetase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=metK PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GE+TT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHEAM (S-adenosylmethionine synthetase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=metK PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19
Identity = 48/79 (60.76%), Postives = 58/79 (73.42%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GEITT A VD +++ R T R IG+V +D+G DAD C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ALISL (S-adenosylmethionine synthetase OS=Aliivibrio salmonicida (strain LFI1238) GN=metK PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.964e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GE+TT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_VIBVY (S-adenosylmethionine synthetase OS=Vibrio vulnificus (strain YJ016) GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19
Identity = 47/79 (59.49%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEELTRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_VIBVU (S-adenosylmethionine synthetase OS=Vibrio vulnificus GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19
Identity = 47/79 (59.49%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEELTRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_VIBPA (S-adenosylmethionine synthetase OS=Vibrio parahaemolyticus GN=metK PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.565e-19
Identity = 47/79 (59.49%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEELTRETVREIGYVHSDMGFDANSCAVLNTIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_LACSS (S-adenosylmethionine synthetase OS=Lactobacillus sakei subsp. sakei (strain 23K) GN=metK PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.350e-19
Identity = 44/89 (49.44%), Postives = 62/89 (69.66%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEE 268
            DA LEQDP+++VACET   T +V+V GEI+T A VD +KVVR+T + IG+     G D D C V+V +++QSP+IAQ V  +L  R ++
Sbjct:   30 DAMLEQDPQARVACETTVTTGLVLVVGEISTTAYVDIQKVVRETIKKIGYRDGQYGFDGDNCAVIVALDEQSPDIAQGVDDSLESREKD 118          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PSEA6 (S-adenosylmethionine synthetase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=metK PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.376e-19
Identity = 49/91 (53.85%), Postives = 63/91 (69.23%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA L+QDP+++VACET  KT MVMV GE+TT A VD +++ R+T R IG+  +D+G DAD C VL  I KQSP+I Q V      RPE+ G
Sbjct:   29 DAILKQDPKARVACETYVKTGMVMVGGEVTTNAWVDIEELTRNTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVD---RTRPEDQG 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHISS (S-adenosylmethionine synthetase OS=Shigella sonnei (strain Ss046) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHIFL (S-adenosylmethionine synthetase OS=Shigella flexneri GN=metK PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_VIBF11.964e-1958.23S-adenosylmethionine synthetase OS=Vibrio fischeri... [more]
METK_SHEAM1.964e-1960.76S-adenosylmethionine synthetase OS=Shewanella amaz... [more]
METK_ALISL1.964e-1958.23S-adenosylmethionine synthetase OS=Aliivibrio salm... [more]
METK_VIBVY2.565e-1959.49S-adenosylmethionine synthetase OS=Vibrio vulnific... [more]
METK_VIBVU2.565e-1959.49S-adenosylmethionine synthetase OS=Vibrio vulnific... [more]
METK_VIBPA2.565e-1959.49S-adenosylmethionine synthetase OS=Vibrio parahaem... [more]
METK_LACSS3.350e-1949.44S-adenosylmethionine synthetase OS=Lactobacillus s... [more]
METK_PSEA64.376e-1953.85S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_SHISS5.715e-1958.23S-adenosylmethionine synthetase OS=Shigella sonnei... [more]
METK_SHIFL5.715e-1958.23S-adenosylmethionine synthetase OS=Shigella flexne... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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