DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHIF8 (S-adenosylmethionine synthetase OS=Shigella flexneri serotype 5b (strain 8401) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHIDS (S-adenosylmethionine synthetase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHIBS (S-adenosylmethionine synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHIB3 (S-adenosylmethionine synthetase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHEWM (S-adenosylmethionine synthetase OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 45/79 (56.96%), Postives = 58/79 (73.42%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GE+TT A VD +++ R+T R IG+  +D+G DAD C +L  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRNTVREIGYTHSDMGFDADSCAILNVIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHESH (S-adenosylmethionine synthetase OS=Shewanella sediminis (strain HAW-EB3) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 57/79 (72.15%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GE+TT A VD +++ R T R IG+  +D+G DAD C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PHOLL (S-adenosylmethionine synthetase OS=Photorhabdus luminescens subsp. laumondii GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MVMV GEITT A VD +++ R T R IG+V++++G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVMVGGEITTSAWVDIEEITRQTVREIGYVNSEMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_KLEP7 (S-adenosylmethionine synthetase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_KLEP3 (S-adenosylmethionine synthetase OS=Klebsiella pneumoniae (strain 342) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ESCF3 (S-adenosylmethionine synthetase OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SHIF85.715e-1958.23S-adenosylmethionine synthetase OS=Shigella flexne... [more]
METK_SHIDS5.715e-1958.23S-adenosylmethionine synthetase OS=Shigella dysent... [more]
METK_SHIBS5.715e-1958.23S-adenosylmethionine synthetase OS=Shigella boydii... [more]
METK_SHIB35.715e-1958.23S-adenosylmethionine synthetase OS=Shigella boydii... [more]
METK_SHEWM5.715e-1956.96S-adenosylmethionine synthetase OS=Shewanella wood... [more]
METK_SHESH5.715e-1958.23S-adenosylmethionine synthetase OS=Shewanella sedi... [more]
METK_PHOLL5.715e-1958.23S-adenosylmethionine synthetase OS=Photorhabdus lu... [more]
METK_KLEP75.715e-1958.23S-adenosylmethionine synthetase OS=Klebsiella pneu... [more]
METK_KLEP35.715e-1958.23S-adenosylmethionine synthetase OS=Klebsiella pneu... [more]
METK_ESCF35.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia fer... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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