DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ERWT9 (S-adenosylmethionine synthetase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRQTVRDIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ENTS8 (S-adenosylmethionine synthetase OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ENT38 (S-adenosylmethionine synthetase OS=Enterobacter sp. (strain 638) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECOSM (S-adenosylmethionine synthetase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECOSE (S-adenosylmethionine synthetase OS=Escherichia coli (strain SE11) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECOLU (S-adenosylmethionine synthetase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECOLI (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12) GN=metK PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECOLC (S-adenosylmethionine synthetase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECOL6 (S-adenosylmethionine synthetase OS=Escherichia coli O6 GN=metK PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECOL5 (S-adenosylmethionine synthetase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ERWT95.715e-1958.23S-adenosylmethionine synthetase OS=Erwinia tasmani... [more]
METK_ENTS85.715e-1958.23S-adenosylmethionine synthetase OS=Enterobacter sa... [more]
METK_ENT385.715e-1958.23S-adenosylmethionine synthetase OS=Enterobacter sp... [more]
METK_ECOSM5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOSE5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLU5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLI5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOLC5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOL65.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOL55.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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