DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECOHS (S-adenosylmethionine synthetase OS=Escherichia coli O9:H4 (strain HS) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECODH (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12 / DH10B) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECOBW (S-adenosylmethionine synthetase OS=Escherichia coli (strain K12 / BW2952) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECO8A (S-adenosylmethionine synthetase OS=Escherichia coli O8 (strain IAI1) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECO7I (S-adenosylmethionine synthetase OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECO5E (S-adenosylmethionine synthetase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECO57 (S-adenosylmethionine synthetase OS=Escherichia coli O157:H7 GN=metK PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECO55 (S-adenosylmethionine synthetase OS=Escherichia coli (strain 55989 / EAEC) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECO27 (S-adenosylmethionine synthetase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
[Close]
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ECO24 (S-adenosylmethionine synthetase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=metK PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.715e-19
Identity = 46/79 (58.23%), Postives = 59/79 (74.68%), Query Frame = 2 
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_ECOHS5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECODH5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECOBW5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO8A5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO7I5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO5E5.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO575.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO555.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO275.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]
METK_ECO245.715e-1958.23S-adenosylmethionine synthetase OS=Escherichia col... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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