DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SERP5 (S-adenosylmethionine synthetase OS=Serratia proteamaculans (strain 568) GN=metK PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.748e-19
Identity = 46/79 (58.23%), Postives = 58/79 (73.42%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GEITT A VD +++ R T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRKTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_PSEHT (S-adenosylmethionine synthetase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=metK PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.748e-19
Identity = 49/91 (53.85%), Postives = 60/91 (65.93%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEIG 274
            DA LEQD  ++VACET  KT MVMV GEITT A VD +++ R T R IG+ ++D+G DAD C +L  I KQSP+I Q V       PEE G
Sbjct:   29 DAILEQDSHARVACETYVKTGMVMVGGEITTSAWVDIEEITRKTIRDIGYTNSDMGFDADSCAILNTIGKQSPDINQGVD---RTSPEEQG 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_TREPS (S-adenosylmethionine synthetase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=metK PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.273e-18
Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHG 244
            DACL QDP S VACET A T+++++ GEI+T+A ++  ++ RD    IG+VSADVGLDA    VL     QSP+IAQ VHG
Sbjct:   28 DACLSQDPHSCVACETFASTSLILIGGEISTRAHINLTQIARDVAADIGYVSADVGLDAASMAVLDMTHHQSPDIAQGVHG 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_TREPA (S-adenosylmethionine synthetase OS=Treponema pallidum GN=metK PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.273e-18
Identity = 44/81 (54.32%), Postives = 57/81 (70.37%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHG 244
            DACL QDP S VACET A T+++++ GEI+T+A ++  ++ RD    IG+VSADVGLDA    VL     QSP+IAQ VHG
Sbjct:   28 DACLSQDPHSCVACETFASTSLILIGGEISTRAHINLTQIARDVAADIGYVSADVGLDAASMAVLDMTHHQSPDIAQGVHG 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHEDO (S-adenosylmethionine synthetase OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013) GN=metK PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.273e-18
Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP+++VACET  KT MV+V GE+TT A VD +++ R T R IG+  +D+G DAD C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEEITRKTVREIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SALTY (S-adenosylmethionine synthetase OS=Salmonella typhimurium GN=metK PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.273e-18
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L+QDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILQQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SALTI (S-adenosylmethionine synthetase OS=Salmonella typhi GN=metK PE=3 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 1.273e-18
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L+QDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILQQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SALSV (S-adenosylmethionine synthetase OS=Salmonella schwarzengrund (strain CVM19633) GN=metK PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.273e-18
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L+QDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILQQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SALPK (S-adenosylmethionine synthetase OS=Salmonella paratyphi A (strain AKU_12601) GN=metK PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.273e-18
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L+QDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILQQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SALPA (S-adenosylmethionine synthetase OS=Salmonella paratyphi A GN=metK PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.273e-18
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L+QDP+++VACET  KT MV+V GEITT A VD +++ R+T R IG+V +D+G DA+ C VL  I KQSP+I Q V
Sbjct:   29 DAILQQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPDINQGV 107          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SERP59.748e-1958.23S-adenosylmethionine synthetase OS=Serratia protea... [more]
METK_PSEHT9.748e-1953.85S-adenosylmethionine synthetase OS=Pseudoalteromon... [more]
METK_TREPS1.273e-1854.32S-adenosylmethionine synthetase OS=Treponema palli... [more]
METK_TREPA1.273e-1854.32S-adenosylmethionine synthetase OS=Treponema palli... [more]
METK_SHEDO1.273e-1856.96S-adenosylmethionine synthetase OS=Shewanella deni... [more]
METK_SALTY1.273e-1856.96S-adenosylmethionine synthetase OS=Salmonella typh... [more]
METK_SALTI1.273e-1856.96S-adenosylmethionine synthetase OS=Salmonella typh... [more]
METK_SALSV1.273e-1856.96S-adenosylmethionine synthetase OS=Salmonella schw... [more]
METK_SALPK1.273e-1856.96S-adenosylmethionine synthetase OS=Salmonella para... [more]
METK_SALPA1.273e-1856.96S-adenosylmethionine synthetase OS=Salmonella para... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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