DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHESR (S-adenosylmethionine synthetase OS=Shewanella sp. (strain MR-7) GN=metK PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QDP+++VACET  KT MV+V GE+TT A VD +++ R T R IG+V +D+G DAD C VL  I KQSP+I Q V
Sbjct:   29 DAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHESM (S-adenosylmethionine synthetase OS=Shewanella sp. (strain MR-4) GN=metK PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QDP+++VACET  KT MV+V GE+TT A VD +++ R T R IG+V +D+G DAD C VL  I KQSP+I Q V
Sbjct:   29 DAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHESA (S-adenosylmethionine synthetase OS=Shewanella sp. (strain ANA-3) GN=metK PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 45/79 (56.96%), Postives = 57/79 (72.15%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QDP+++VACET  KT MV+V GE+TT A VD +++ R T R IG+V +D+G DAD C VL  I KQSP+I Q V
Sbjct:   29 DAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYVHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_METFK (S-adenosylmethionine synthetase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=metK PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 44/80 (55.00%), Postives = 57/80 (71.25%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVH 241
            DA LEQDP ++VA ET   T +V++ GEITT A VDY K+ RDT + IG+ +AD G+D   C VLV  +KQSP+IAQ V+
Sbjct:   29 DAILEQDPTARVAAETLTNTGLVVLAGEITTTANVDYIKIARDTIKRIGYDNADYGIDYKSCAVLVAYDKQSPDIAQGVN 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKR 259
            DA LE+DP ++VACET   T +V+V GEITT   VD  ++VRDT R IG+  A  G DAD C VL  I++QSP+IA  V   L  R
Sbjct:   31 DAILEKDPNARVACETSVTTGLVLVSGEITTSTYVDIPRIVRDTVREIGYTRAKFGFDADTCAVLTAIDEQSPDIAMGVDQALEAR 116          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_CARHZ (S-adenosylmethionine synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=metK PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 44/90 (48.89%), Postives = 59/90 (65.56%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPEEI 271
            DA L QDP+++VACET   T +V+V GEITT   VD  KVVR+T R IG+  A  G D D C V+ +I++QSP+IA  V+  L  +  E+
Sbjct:   29 DAILAQDPQARVACETAVTTGLVLVIGEITTSCYVDIPKVVRETIREIGYTRAKYGFDGDTCAVITSIDEQSPDIALGVNRALEAKTGEM 118          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_ALTMD (S-adenosylmethionine synthetase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=metK PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.704e-18
Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA LEQDP ++VACET  KT MV+V GE+TT A VD +++ R+T + IG+  +D+G DAD C VL  I KQSP+I Q V
Sbjct:   29 DAILEQDPRARVACETYVKTGMVLVGGEVTTSAWVDIEELTRNTVKEIGYTHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_SHEON (S-adenosylmethionine synthetase OS=Shewanella oneidensis GN=metK PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.838e-18
Identity = 44/79 (55.70%), Postives = 57/79 (72.15%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QDP+++VACET  KT MV+V GE+TT A VD +++ R T R IG++ +D+G DAD C VL  I KQSP+I Q V
Sbjct:   29 DAILAQDPKARVACETYVKTGMVLVGGEVTTSAWVDIEELTRKTVREIGYIHSDMGFDADSCAVLNAIGKQSPDINQGV 107          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_RHOBA (S-adenosylmethionine synthetase OS=Rhodopirellula baltica GN=metK PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.838e-18
Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGN 247
            DA L QDP S+VACET   T + ++ GEI++KA VDY+K+VRDT   +G+   D+G+D   C+V + ++ QSP+IAQ V+ +
Sbjct:   33 DALLAQDPHSRVACETLVTTGLAVIAGEISSKADVDYEKIVRDTIVAVGYDDPDIGIDGKTCEVQIRLDAQSPDIAQGVNSD 114          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_NITEC (S-adenosylmethionine synthetase OS=Nitrosomonas eutropha (strain C91) GN=metK PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.838e-18
Identity = 44/88 (50.00%), Postives = 58/88 (65.91%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVHGNLSKRPE 265
            DA L+QDP ++VACET   T ++++ GEITT A +DY  + RDT R IG+ S+++G DA  C VL    KQSP+IA  V  N SK  E
Sbjct:   29 DAILQQDPHARVACETMCSTGLIVLSGEITTHATIDYNVIPRDTVREIGYTSSEIGFDASTCAVLTAFNKQSPDIALGV--NRSKEEE 114          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SHESR3.704e-1856.96S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHESM3.704e-1856.96S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHESA3.704e-1856.96S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_METFK3.704e-1855.00S-adenosylmethionine synthetase OS=Methylobacillus... [more]
METK_GEOTN3.704e-1852.33S-adenosylmethionine synthetase OS=Geobacillus the... [more]
METK_CARHZ3.704e-1848.89S-adenosylmethionine synthetase OS=Carboxydothermu... [more]
METK_ALTMD3.704e-1855.70S-adenosylmethionine synthetase OS=Alteromonas mac... [more]
METK_SHEON4.838e-1855.70S-adenosylmethionine synthetase OS=Shewanella onei... [more]
METK_RHOBA4.838e-1847.56S-adenosylmethionine synthetase OS=Rhodopirellula ... [more]
METK_NITEC4.838e-1850.00S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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