DN135221

Overview
NameDN135221
Unique NameDN135221
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length276
Libraries
Library NameType
Mature Juice Sac from Navel Orange in Vulnus5 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BURP0 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 1106a) GN=metK PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  S+VA ET   T +V++ GEITT A +DY ++ RDT + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BURMS (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain SAVP1) GN=metK PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  S+VA ET   T +V++ GEITT A +DY ++ RDT + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BURMA (S-adenosylmethionine synthetase OS=Burkholderia mallei GN=metK PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  S+VA ET   T +V++ GEITT A +DY ++ RDT + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BURM9 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10229) GN=metK PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  S+VA ET   T +V++ GEITT A +DY ++ RDT + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_BURM7 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10247) GN=metK PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  S+VA ET   T +V++ GEITT A +DY ++ RDT + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYRGCAVLVAYDKQSPDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_AZOSB (S-adenosylmethionine synthetase OS=Azoarcus sp. (strain BH72) GN=metK PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.935e-15
Identity = 36/80 (45.00%), Postives = 55/80 (68.75%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSVH 241
            DA L +DP+++VACET   T +V++ GEITT A  +Y+++ +D  R IG+ ++D+G D   C VL  I +QS +IAQ V+
Sbjct:   30 DAILAEDPKARVACETLVSTGLVVISGEITTSAHPNYREIAQDVVRRIGYDNSDIGFDYKSCAVLAAINRQSSDIAQGVN 109          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_TRIEI (S-adenosylmethionine synthetase OS=Trichodesmium erythraeum (strain IMS101) GN=metK PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.833e-15
Identity = 39/79 (49.37%), Postives = 54/79 (68.35%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QDP+S+VA E    T +V++ GEITTKA+V+Y ++ R     IG+V A+ G  AD C VLV +++QS +IAQ V
Sbjct:   30 DAILAQDPQSRVAAEVVVNTGLVLITGEITTKAQVNYIELARKKIADIGYVHAENGFSADSCSVLVALDEQSADIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_RHOFD (S-adenosylmethionine synthetase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=metK PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.833e-15
Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA  +QDP+S+VA ET   T +V++ GEITT A VDY +V RDT + IG+ + + G+D   C VLV  +KQS +IAQ V
Sbjct:   30 DAIFKQDPKSRVAAETLCNTGLVVLAGEITTNAHVDYIQVARDTLKRIGYDNTEYGIDYKGCAVLVAYDKQSNDIAQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_RHILO (S-adenosylmethionine synthetase OS=Rhizobium loti GN=metK PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.833e-15
Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L  DP+++VACET  KT MV++ GEIT+ A +DY +V RDT   IG+    +G D  +C V++ + +QSP+I+Q V
Sbjct:   30 DAILRTDPKARVACETLVKTGMVVLAGEITSHAVIDYTQVARDTILDIGYDDDGIGFDGRRCAVVLALTEQSPDISQGV 108          
BLAST of DN135221 vs. ExPASy Swiss-Prot
Match: METK_RALEH (S-adenosylmethionine synthetase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=metK PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.833e-15
Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2
Query:    2 DACLEQDPESKVACETCAKTNMVMVFGEITTKAKVDYKKVVRDTCRGIGFVSADVGLDADKCKVLVNIEKQSPEIAQSV 238
            DA L QD  ++VA ET   T +V++ GEITT A VDY ++ RDT + IG+ + D G+D   C VLV  +KQSP+IAQ V
Sbjct:   30 DAILAQDKYARVAAETLCNTGLVVLAGEITTTANVDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGV 108          
The following BLAST results are available for this feature:
BLAST of DN135221 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURP02.935e-1550.63S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURMS2.935e-1550.63S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURMA2.935e-1550.63S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM92.935e-1550.63S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM72.935e-1550.63S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_AZOSB2.935e-1545.00S-adenosylmethionine synthetase OS=Azoarcus sp. (s... [more]
METK_TRIEI3.833e-1549.37S-adenosylmethionine synthetase OS=Trichodesmium e... [more]
METK_RHOFD3.833e-1550.63S-adenosylmethionine synthetase OS=Rhodoferax ferr... [more]
METK_RHILO3.833e-1546.84S-adenosylmethionine synthetase OS=Rhizobium loti ... [more]
METK_RALEH3.833e-1550.63S-adenosylmethionine synthetase OS=Ralstonia eutro... [more]

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Properties
Property NameValue
Genbank descriptionwca08b01 Mature Juice Sac from Navel Orange in Vulnus5 vector Citrus sinensis cDNA clone wca08b01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DN135221 ID=DN135221; Name=DN135221; organism=Citrus sinensis; type=EST; length=276bp
GGATGCTTGTCTGGAACAAGACCCGGAGAGTAAAGTTGCTTGTGAGACCT
GTGCTAAAACAAATATGGTTATGGTCTTTGGTGAGATAACAACCAAGGCC
AAAGTGGATTACAAAAAGGTTGTTCGTGACACTTGCAGAGGCATTGGATT
TGTCTCAGCTGATGTTGGACTTGATGCCGATAAGTGCAAGGTCCTCGTCA
ATATTGAAAAGCAAAGCCCTGAAATTGCTCAAAGTGTTCATGGCAACTTG
AGCAAGAGGCCTGAGGAAATTGGTGC
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